RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 SMPD4Q9NXE4 827 aa20.37■□□□□ 0.85
CTSA-217ENST00000607482 ARHGAP26Q9UNA1 814 aa20.37■□□□□ 0.85
CTSA-217ENST00000607482 SLC16A3O15427 465 aaKnown RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 MBL2P11226 248 aaPredicted RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 CHRNB1P11230 501 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 ARSAP15289 507 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 MAP3K7CLP57077 242 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 ANKRD40Q6AI12 368 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 KLHL10Q6JEL2 608 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 ADSSL1Q8N142 457 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 CRYBG2Q8N1P7 616 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 TTC39CQ8N584 583 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 C12orf29Q8N999 325 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 JAKMIP2Q96AA8 810 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 DHTKD1Q96HY7 919 aaPredicted RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 FAM126AQ9BYI3 521 aaPredicted RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 FBXO44Q9H4M3 255 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 RBM12Q9NTZ6 932 aaKnown RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 RAB20Q9NX57 234 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 ZSCAN32Q9NX65 697 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 GCNT4Q9P109 453 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 ARMCX3Q9UH62 379 aaPredicted RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 CHORDC1Q9UHD1 332 aaPredicted RBP20.36■□□□□ 0.85
CTSA-217ENST00000607482 PCDHGA2Q9Y5H1 932 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 WNT6Q9Y6F9 365 aa20.36■□□□□ 0.85
CTSA-217ENST00000607482 F5P12259 2224 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 SHISA7A6NL88 538 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 SLC5A3P53794 718 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 FZD5Q13467 585 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 ZNF77Q15935 545 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 CCDC40Q4G0X9 1142 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 COBLL1Q53SF7 1204 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 HECTD3Q5T447 861 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 TXNDC11Q6PKC3 985 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 MAML2Q8IZL2 1156 aaPredicted RBP20.35■□□□□ 0.85
CTSA-217ENST00000607482 FUKQ8N0W3 1084 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 SYNPOQ8N3V7 929 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 SPEM1Q8N4L4 309 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 OVCA2Q8WZ82 227 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 CYFIP2Q96F07 1278 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 HEXIM2Q96MH2 286 aaKnown RBP20.35■□□□□ 0.85
CTSA-217ENST00000607482 HPS4Q9NQG7 708 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 COMMD8Q9NX08 183 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 HMGXB4Q9UGU5 601 aa20.35■□□□□ 0.85
CTSA-217ENST00000607482 LEFTY2O00292 366 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 SLC9A3R1O14745 358 aaPredicted RBP20.34■□□□□ 0.85
CTSA-217ENST00000607482 NFATC1O95644 943 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 ZNF394Q53GI3 561 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 DDX42Q86XP3 938 aaKnown RBP eCLIP20.34■□□□□ 0.85
CTSA-217ENST00000607482 ELOA2Q8IYF1 753 aaPredicted RBP20.34■□□□□ 0.85
CTSA-217ENST00000607482 ZNF687Q8N1G0 1237 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 SCAMP5Q8TAC9 235 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
CTSA-217ENST00000607482 P2RY13Q9BPV8 354 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 ECT2Q9H8V3 914 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 APOBEC3GQ9HC16 384 aaKnown RBP20.34■□□□□ 0.85
CTSA-217ENST00000607482 MAN1B1Q9UKM7 699 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 CPQQ9Y646 472 aa20.34■□□□□ 0.85
CTSA-217ENST00000607482 BICDL2A1A5D9 508 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 TRIM49BA6NDI0 452 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 BIN1O00499 593 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 ATG13O75143 517 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 ANP32AP39687 249 aaKnown RBP20.33■□□□□ 0.85
CTSA-217ENST00000607482 SLC8A3P57103 927 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 INCA1Q0VD86 236 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 CETN1Q12798 172 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 USP4Q13107 963 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 PAQR9Q6ZVX9 377 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 SPATA20Q8TB22 786 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 METTL14Q9HCE5 456 aaKnown RBP20.33■□□□□ 0.85
CTSA-217ENST00000607482 PRMT8Q9NR22 394 aaPredicted RBP20.33■□□□□ 0.85
CTSA-217ENST00000607482 TMEM30AQ9NV96 361 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 CFAP97Q9P2B7 532 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 RAB23Q9ULC3 237 aa20.33■□□□□ 0.85
CTSA-217ENST00000607482 CACNA1IQ9P0X4 2223 aa20.33■□□□□ 0.84
CTSA-217ENST00000607482 USP34Q70CQ2 3546 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 GADD45BO75293 160 aaPredicted RBP20.32■□□□□ 0.84
CTSA-217ENST00000607482 DRD1P21728 446 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 YWHAEP62258 255 aaKnown RBP20.32■□□□□ 0.84
CTSA-217ENST00000607482 SLC7A9P82251 487 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 SATB1Q01826 763 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 Q6ZS52 159 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 HNRNPABQ99729 332 aaKnown RBP20.32■□□□□ 0.84
CTSA-217ENST00000607482 RNF38Q9H0F5 515 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 TLR8Q9NR97 1041 aaKnown RBP20.32■□□□□ 0.84
CTSA-217ENST00000607482 CHMP5Q9NZZ3 219 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 GMIPQ9P107 970 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 SH3BP1Q9Y3L3 701 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 VPS13AQ96RL7 3174 aa20.32■□□□□ 0.84
CTSA-217ENST00000607482 CILPO75339 1184 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 GJA4P35212 333 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 PMS1P54277 932 aaKnown RBP20.31■□□□□ 0.84
CTSA-217ENST00000607482 EML3Q32P44 896 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 MAMSTRQ6ZN01 415 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 FILIP1Q7Z7B0 1213 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 RIN3Q8TB24 985 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 NELFBQ8WX92 580 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 SEMA4DQ92854 862 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 FAXDC2Q96IV6 333 aa20.31■□□□□ 0.84
CTSA-217ENST00000607482 CEP63Q96MT8 703 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms