RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TCN1P20061 433 aaPredicted RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 PFKPQ01813 784 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 BANPQ8N9N5 519 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 AGR3Q8TD06 166 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 GRK7Q8WTQ7 553 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 TEKT1Q969V4 418 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 TCHPQ9BT92 498 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 TRPC7Q9HCX4 862 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 NDUFA13Q9P0J0 144 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 GNEQ9Y223 722 aaKnown RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 POMPQ9Y244 141 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 SH3PXD2BA1X283 911 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 DENND3A2RUS2 1198 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 PPP3CAQ08209 521 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 METTL21CQ5VZV1 264 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 THOC7Q6I9Y2 204 aaKnown RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 TRIM56Q9BRZ2 755 aaKnown RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 SEMA6AQ9H2E6 1030 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 RSL24D1Q9UHA3 163 aaKnown RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 SOX13Q9UN79 622 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 DNM3Q9UQ16 869 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 SGK1O00141 431 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 NCF2P19878 526 aaPredicted RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 STIP1P31948 543 aaKnown RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 CLVS1Q8IUQ0 354 aaPredicted RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 ZC3H3Q8IXZ2 948 aaKnown RBP15.81■□□□□ 0.12
CIRBP-228ENST00000590347 RABGEF1Q9UJ41 708 aa15.81■□□□□ 0.12
CIRBP-228ENST00000590347 TCRBV7S3A2A0A539 114 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 DGKIO75912 1065 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ZBTB11O95625 1053 aaPredicted RBP15.8■□□□□ 0.12
CIRBP-228ENST00000590347 KRT5P13647 590 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 AKR1B1P15121 316 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ANXA13P27216 316 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 CPOXP36551 454 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 CYP2W1Q8TAV3 490 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ZNF398Q8TD17 642 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ACTRT2Q8TDY3 377 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 EYA3Q99504 573 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ACSS2Q9NR19 701 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 CFLARO15519 480 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ITM2AO43736 263 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 PPP1R11O60927 126 aaPredicted RBP15.8■□□□□ 0.12
CIRBP-228ENST00000590347 FAM13AO94988 1023 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 NR4A1P22736 598 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ETFBP38117 255 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 HDAC4P56524 1084 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 PSMC1P62191 440 aaKnown RBP15.8■□□□□ 0.12
CIRBP-228ENST00000590347 FMO1Q01740 532 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 CARTPTQ16568 116 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 EML3Q32P44 896 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 FBXO36Q8NEA4 188 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 ZDHHC7Q9NXF8 308 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 FRMD4BQ9Y2L6 1034 aa15.8■□□□□ 0.12
CIRBP-228ENST00000590347 PCNTO95613 3336 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 I3L4J1 428 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 TOM1L1O75674 476 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 GMPRP36959 345 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 PTK7Q13308 1070 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 CYP2A13Q16696 494 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 DNAL1Q4LDG9 190 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 C12orf60Q5U649 245 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 PACS1Q6VY07 963 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 PALM2Q8IXS6 379 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 CDC14AQ9UNH5 594 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 H3BNX3 289 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 CACNB3P54284 484 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 C16orf87Q6PH81 154 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 TTC13Q8NBP0 860 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 NEURL2Q9BR09 285 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 GPATCH1Q9BRR8 931 aaKnown RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 MAN1C1Q9NR34 630 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 SLC38A7Q9NVC3 462 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 CDH22Q9UJ99 828 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 F5H6K3 240 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 KLRC2P26717 231 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 PKNOX1P55347 436 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 PEX3P56589 373 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 PRAMEP78395 509 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 OTUD4Q01804 1114 aaKnown RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 CAV1Q03135 178 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 SNX29P2Q8IUI4 249 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 TMCO5AQ8N6Q1 288 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 Q8N9G6 341 aaPredicted RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 USP13Q92995 863 aaPredicted RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 DCPSQ96C86 337 aaKnown RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 WDR83Q9BRX9 315 aaKnown RBP15.79■□□□□ 0.12
CIRBP-228ENST00000590347 VPS11Q9H270 941 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 ZFYVE28Q9HCC9 887 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 GPAMQ9HCL2 828 aa15.79■□□□□ 0.12
CIRBP-228ENST00000590347 G3V3G9 751 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 NOP56O00567 594 aaKnown RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 CSPG5O95196 566 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 ZBTB7AO95365 584 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 ADSSP30520 456 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 MAP3K21Q5TCX8 1036 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 KCTD1Q719H9 257 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms