RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	FAM83C	Q9BQN1	747 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	ZSWIM1	Q9BR11	485 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	MFSD1	Q9H3U5	465 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	TRPC7	Q9HCX4	862 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	TDP1	Q9NUW8	608 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	MYO16	Q9Y6X6	1858 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	OTOL1	A6NHN0	477 aa	Predicted RBP	18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	ZNF263	O14978	683 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	FAM200B	P0CF97	657 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	YWHAQ	P27348	245 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	AVPR1A	P37288	418 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	TNK2	Q07912	1038 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	IFRD2	Q12894	506 aa	Predicted RBP	18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	USP4	Q13107	963 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	ZNF77	Q15935	545 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	SNX30	Q5VWJ9	437 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	DPY19L2P1	Q6NXN4	242 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	TPRG1	Q6ZUI0	275 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	TTC30A	Q86WT1	665 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	IRF7	Q92985	503 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	HEXIM2	Q96MH2	286 aa	Known RBP	18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	NT5C1B	Q96P26	610 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	DUSP16	Q9BY84	665 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	INTS2	Q9H0H0	1204 aa	Known RBP	18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	HPS4	Q9NQG7	708 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	TRPM5	Q9NZQ8	1165 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	GMIP	Q9P107	970 aa		18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	CHORDC1	Q9UHD1	332 aa	Predicted RBP	18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	ARIH1	Q9Y4X5	557 aa	Predicted RBP	18.32	■□□□□ 0.52
MBD1-221	ENST00000589867	TRAV19	A0A0A6YYK7	116 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	RTN3	O95197	1032 aa	Predicted RBP	18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	FGFR1OP	O95684	399 aa	Known RBP	18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	CALCA	P01258	141 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	TARS	P26639	723 aa	Known RBP	18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	ZNF132	P52740	706 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	APBA1	Q02410	837 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	MIIP	Q5JXC2	388 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	RRAGA	Q7L523	313 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	CCDC105	Q8IYK2	499 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	TTC39C	Q8N584	583 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	PJA1	Q8NG27	643 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	TFAP2B	Q92481	460 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	FBXO32	Q969P5	355 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	CRACR2A	Q9BSW2	395 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	THAP9	Q9H5L6	903 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	SAMSN1	Q9NSI8	373 aa	Known RBP	18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	COMMD8	Q9NX08	183 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	OSER1	Q9NX31	292 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	GTSE1	Q9NYZ3	720 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	TMEM63C	Q9P1W3	806 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	ARHGAP26	Q9UNA1	814 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	HCN4	Q9Y3Q4	1203 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	MYO15A	Q9UKN7	3530 aa		18.31	■□□□□ 0.52
MBD1-221	ENST00000589867	KANSL1L	A0AUZ9	987 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	TULP2	O00295	520 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	DPYSL4	O14531	572 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	DCN	P07585	359 aa	Known RBP	18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	USP17L7	P0C7H9	530 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	TCF3	P15923	654 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	HDC	P19113	662 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	TBXAS1	P24557	533 aa	Predicted RBP	18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	SOX9	P48436	509 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	PPP3CC	P48454	512 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	SLC7A9	P82251	487 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	PKDCC	Q504Y2	493 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	ARHGAP29	Q52LW3	1261 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	TRIM68	Q6AZZ1	485 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	GJB7	Q6PEY0	223 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	TXNDC11	Q6PKC3	985 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	PPM1K	Q8N3J5	372 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	OVCA2	Q8WZ82	227 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	JAKMIP2	Q96AA8	810 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	ZFR	Q96KR1	1074 aa	Known RBP	18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	KIF9	Q9HAQ2	790 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	PNPLA8	Q9NP80	782 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	LTB4R2	Q9NPC1	389 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	GKN1	Q9NS71	199 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	CNTN6	Q9UQ52	1028 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	VPS13A	Q96RL7	3174 aa		18.3	■□□□□ 0.52
MBD1-221	ENST00000589867	MYOF	Q9NZM1	2061 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	GOLGA6L22	H0YM25	854 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867		O00370	1275 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	GABBR2	O75899	941 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	CKM	P06732	381 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	PFKL	P17858	780 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SLC9A1	P19634	815 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	KIF11	P52732	1056 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	GCNT1	Q02742	428 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	HSP90AA4P	Q58FG1	418 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SCD5	Q86SK9	330 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	YAF2	Q8IY57	180 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	TTC8	Q8TAM2	541 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SH3RF2	Q8TEC5	729 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SHD	Q96IW2	340 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SLITRK1	Q96PX8	696 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	KCNH6	Q9H252	994 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	NMUR1	Q9HB89	426 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SIX2	Q9NPC8	291 aa		18.29	■□□□□ 0.52

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