RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NDST1P52848 882 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 VCPP55072 806 aaKnown RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 CDH8P55286 799 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 MAGOHP61326 146 aaKnown RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 TAZQ16635 292 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 PTGISQ16647 500 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 KIZQ2M2Z5 673 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 DAB2IPQ5VWQ8 1189 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 IZUMO3Q5VZ72 239 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS25-202ENST00000589219 ALLCQ8N6M5 410 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 BCAS4Q8TDM0 211 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 HEMGNQ9BXL5 484 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 EPN3Q9H201 632 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 CDC42EP4Q9H3Q1 356 aaKnown RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 PCDH9Q9HC56 1237 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 KLHL11Q9NVR0 708 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 ASNSD1Q9NWL6 643 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 BCCIPQ9P287 314 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS25-202ENST00000589219 CYTH4Q9UIA0 394 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 ANAPC5Q9UJX4 755 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 UBQLN1Q9UMX0 589 aaKnown RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 NOVA2Q9UNW9 492 aaKnown RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 PI4K2BG5E9Z4 385 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 HAS3O00219 553 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 DPYSL4O14531 572 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 CSDE1O75534 798 aaKnown RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 TCEA3O75764 348 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 RNF8O76064 485 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 SHBGP04278 402 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 CSF2RAP15509 400 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 GPD1P21695 349 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 DNAJB2P25686 324 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 RFC1P35251 1148 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 SCNN1AP37088 669 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 PNPLA4P41247 253 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 GPD2P43304 727 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 SLC29A2Q14542 456 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 OASLQ15646 514 aaKnown RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 GOLGA7BQ2TAP0 167 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 TMEM240Q5SV17 173 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 FAM102AQ5T9C2 384 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 BBS12Q6ZW61 710 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 TAOK1Q7L7X3 1001 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 GSTA5Q7RTV2 222 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 CCDC25Q86WR0 208 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 ZDHHC17Q8IUH5 632 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 RIBC1Q8N443 379 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 ZCCHC9Q8N567 271 aaKnown RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 MAFAQ8NHW3 353 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 JOSD2Q8TAC2 188 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 CENPTQ96BT3 561 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 HEXIM2Q96MH2 286 aaKnown RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 TTC25Q96NG3 672 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 SERPINB12Q96P63 405 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 CNPY3Q9BT09 278 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 PPP1R12CQ9BZL4 782 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 FAM49AQ9H0Q0 323 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 TTYH1Q9H313 450 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 SEMA4AQ9H3S1 761 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 IL23AQ9NPF7 189 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 AAASQ9NRG9 546 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 SETD4Q9NVD3 440 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 TSPAN16Q9UKR8 245 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 SHOC2Q9UQ13 582 aa10.44□□□□□ -0.74
VPS25-202ENST00000589219 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.44□□□□□ -0.74
VPS25-202ENST00000589219 C3orf70A6NLC5 250 aaPredicted RBP10.43□□□□□ -0.74
VPS25-202ENST00000589219 SMAPO00193 183 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 EBAG9O00559 213 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 NDUFAB1O14561 156 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 RASGRF2O14827 1237 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 TP73O15350 636 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 KPNA6O60684 536 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 CAND2O75155 1236 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 RECQL4O94761 1208 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 TTC4O95801 387 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 GNAT1P11488 350 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 FOSL2P15408 326 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 TCF4P15884 667 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 CYP3A5P20815 502 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 HOXA11P31270 313 aaPredicted RBP10.43□□□□□ -0.74
VPS25-202ENST00000589219 CYP2C18P33260 490 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 ZNF143P52747 638 aaPredicted RBP10.43□□□□□ -0.74
VPS25-202ENST00000589219 GUCY1A3Q02108 690 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 MORF4L2Q15014 288 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 LLGL1Q15334 1064 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 ZBTB6Q15916 424 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 TNFAIP8L3Q5GJ75 292 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 KAZNQ674X7 775 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 ARHGAP17Q68EM7 881 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 HIBCHQ6NVY1 386 aaPredicted RBP10.43□□□□□ -0.74
VPS25-202ENST00000589219 MICALCLQ6ZW33 695 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 B4GALNT4Q76KP1 1039 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 ANKS1BQ7Z6G8 1248 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 PCGF5Q86SE9 256 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 SRLQ86TD4 932 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 SESTD1Q86VW0 696 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 VSIG1Q86XK7 387 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms