RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 MYO1EQ12965 1108 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NR1I3Q14994 352 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ENOX2Q16206 610 aaKnown RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SGSM1Q2NKQ1 1148 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SLC10A6Q3KNW5 377 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZACNQ401N2 412 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CYP4A22Q5TCH4 519 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EEF1DP3Q658K8 133 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TXNDC11Q6PKC3 985 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ANKS3Q6ZW76 656 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CAMKK1Q8N5S9 505 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LRRC52Q8N7C0 313 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 RDH13Q8NBN7 331 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LEMD2Q8NC56 503 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 FBXL13Q8NEE6 735 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF397Q8NF99 534 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZSCAN18Q8TBC5 510 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SPATA18Q8TC71 538 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CCDC127Q96BQ5 260 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TCEAL4Q96EI5 215 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZBTB45Q96K62 511 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF560Q96MR9 790 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GPR88Q9GZN0 384 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DUSP15Q9H1R2 295 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PLCB1Q9NQ66 1216 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 INTS13Q9NVM9 706 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CACNG4Q9UBN1 327 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PARP2Q9UGN5 583 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 KLK13Q9UKR3 277 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF638Q14966 1978 aaKnown RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SHROOM3Q8TF72 1996 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TTLL13PA6NNM8 815 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PRRG1O14668 218 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 KHNYNO15037 678 aaKnown RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ATG13O75143 517 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PHACTR2O75167 634 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 RECQL4O94761 1208 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CAPNS1P04632 268 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EDN1P05305 212 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CXCL8P10145 99 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DLATP10515 647 aaKnown RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HARSP12081 509 aaKnown RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TBXAS1P24557 533 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HOXC13P31276 330 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ELF1P32519 619 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CCR2P41597 374 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PXNP49023 591 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 YWHAEP62258 255 aaKnown RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 RBP5P82980 135 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PLCB2Q00722 1185 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MYL7Q01449 175 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ROR1Q01973 937 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TRPC3Q13507 836 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PON2Q15165 354 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EXOC3L4Q17RC7 722 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SPECC1LQ69YQ0 1117 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 IQCEQ6IPM2 695 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SLC8B1Q6J4K2 584 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ELMOD1Q8N336 334 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF461Q8TAF7 563 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZSWIM3Q96MP5 696 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 OXCT2Q9BYC2 517 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HAPLN2Q9GZV7 340 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 VRTNQ9H8Y1 702 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 KLK14Q9P0G3 267 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MYO6Q9UM54 1294 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DENND4CQ5VZ89 1909 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ABCA7Q8IZY2 2146 aa9.32□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PTPRDP23468 1912 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CEP192Q8TEP8 1941 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PLXND1Q9Y4D7 1925 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SMIM28A0A1B0GU29 152 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 A0A1W2PQJ5 194 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GOLGA8IPA6NC78 632 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GOLGA8JA6NMD2 632 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LRRIQ3A6PVS8 624 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LACTBL1A8MY62 500 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TISP43B9A030 160 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CDX4O14627 284 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TRAPPC3O43617 180 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ABLIM3O94929 683 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 C4BPAP04003 597 aaKnown RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ATP1A3P13637 1013 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ATF2P15336 505 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LRPAP1P30533 357 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 RDXP35241 583 aaKnown RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EPHA5P54756 1037 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GSDMDP57764 484 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TFAMQ00059 246 aaKnown RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 BIRC3Q13489 604 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SV2CQ496J9 727 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ARHGAP29Q52LW3 1261 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms