RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 LRRC63Q05C16 580 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 ZNF77Q15935 545 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 ZNF687Q8N1G0 1237 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 FAM126AQ9BYI3 521 aaPredicted RBP16.45■□□□□ 0.22
SF3B3-215ENST00000577085 PRMT8Q9NR22 394 aaPredicted RBP16.45■□□□□ 0.22
SF3B3-215ENST00000577085 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
SF3B3-215ENST00000577085 GCNT4Q9P109 453 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 WNT6Q9Y6F9 365 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 USP34Q70CQ2 3546 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 MYO15AQ9UKN7 3530 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 SLC16A3O15427 465 aaKnown RBP16.44■□□□□ 0.22
SF3B3-215ENST00000577085 MBL2P11226 248 aaPredicted RBP16.44■□□□□ 0.22
SF3B3-215ENST00000577085 ADORA2BP29275 332 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 SLC5A3P53794 718 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 USP4Q13107 963 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 COBLL1Q53SF7 1204 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 ANKRD40Q6AI12 368 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 ISM2Q6H9L7 571 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 DDX42Q86XP3 938 aaKnown RBP eCLIP16.44■□□□□ 0.22
SF3B3-215ENST00000577085 FUKQ8N0W3 1084 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 CRYBG2Q8N1P7 616 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 SYNPOQ8N3V7 929 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 SPEM1Q8N4L4 309 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 TTC39CQ8N584 583 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 FBXL13Q8NEE6 735 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 OVCA2Q8WZ82 227 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 FBXO44Q9H4M3 255 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 HPS4Q9NQG7 708 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 SMPD4Q9NXE4 827 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 HMGXB4Q9UGU5 601 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 CIZ1Q9ULV3 898 aaPredicted RBP16.44■□□□□ 0.22
SF3B3-215ENST00000577085 OBSL1O75147 1896 aa16.44■□□□□ 0.22
SF3B3-215ENST00000577085 PATJQ8NI35 1801 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 LEFTY2O00292 366 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 NFATC1O95644 943 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 MAP3K7CLP57077 242 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 SLC7A9P82251 487 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 INCA1Q0VD86 236 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 MAMSTRQ6ZN01 415 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 ELOA2Q8IYF1 753 aaPredicted RBP16.43■□□□□ 0.22
SF3B3-215ENST00000577085 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 SPATA20Q8TB22 786 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 JAKMIP2Q96AA8 810 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 DHTKD1Q96HY7 919 aaPredicted RBP16.43■□□□□ 0.22
SF3B3-215ENST00000577085 P2RY13Q9BPV8 354 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 ECT2Q9H8V3 914 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 APOBEC3GQ9HC16 384 aaKnown RBP16.43■□□□□ 0.22
SF3B3-215ENST00000577085 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 ARMCX3Q9UH62 379 aaPredicted RBP16.43■□□□□ 0.22
SF3B3-215ENST00000577085 CHORDC1Q9UHD1 332 aaPredicted RBP16.43■□□□□ 0.22
SF3B3-215ENST00000577085 CPQQ9Y646 472 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 ZNF638Q14966 1978 aaKnown RBP16.43■□□□□ 0.22
SF3B3-215ENST00000577085 DENND4CQ5VZ89 1909 aa16.43■□□□□ 0.22
SF3B3-215ENST00000577085 PIEZO1Q92508 2521 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 SLC9A3R1O14745 358 aaPredicted RBP16.42■□□□□ 0.22
SF3B3-215ENST00000577085 ATG13O75143 517 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 TCF3P15923 654 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 HECTD3Q5T447 861 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 KLHL10Q6JEL2 608 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 Q6ZS52 159 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 PAQR9Q6ZVX9 377 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 RIN3Q8TB24 985 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 SECISBP2LQ93073 1101 aaKnown RBP16.42■□□□□ 0.22
SF3B3-215ENST00000577085 CYFIP2Q96F07 1278 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 HEXIM2Q96MH2 286 aaKnown RBP16.42■□□□□ 0.22
SF3B3-215ENST00000577085 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 PTPRDP23468 1912 aa16.42■□□□□ 0.22
SF3B3-215ENST00000577085 VPS13AQ96RL7 3174 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 CACNA1HO95180 2353 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 OTOL1A6NHN0 477 aaPredicted RBP16.41■□□□□ 0.22
SF3B3-215ENST00000577085 TRDMT1O14717 391 aaKnown RBP16.41■□□□□ 0.22
SF3B3-215ENST00000577085 OAS1P00973 400 aaKnown RBP16.41■□□□□ 0.22
SF3B3-215ENST00000577085 DRD1P21728 446 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 GJA4P35212 333 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 SATB1Q01826 763 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 CCINQ13939 588 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 EML3Q32P44 896 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 ZNF394Q53GI3 561 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 TMEM196Q5HYL7 178 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 FAXDC2Q96IV6 333 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 HNRNPABQ99729 332 aaKnown RBP16.41■□□□□ 0.22
SF3B3-215ENST00000577085 SMOQ99835 787 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 RNF38Q9H0F5 515 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 METTL14Q9HCE5 456 aaKnown RBP16.41■□□□□ 0.22
SF3B3-215ENST00000577085 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
SF3B3-215ENST00000577085 GMIPQ9P107 970 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 CFAP97Q9P2B7 532 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 NCDNQ9UBB6 729 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 RAB23Q9ULC3 237 aa16.41■□□□□ 0.22
SF3B3-215ENST00000577085 TNFRSF10BO14763 440 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 CILPO75339 1184 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 GALK1P51570 392 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms