RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 F13A1P00488 732 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 RHOP08100 348 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 OR4Q2P0C623 313 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 CXCL8P10145 99 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 PLS3P13797 630 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 PTPN2P17706 415 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 RAB6AP20340 208 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 MCM4P33991 863 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 CCR2P41597 374 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 MATR3P43243 847 aaKnown RBP eCLIP6.77□□□□□ -1.33
NUP88-212ENST00000576708 ASPAP45381 313 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 STARD6P59095 220 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 STRN3Q13033 797 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.33
NUP88-212ENST00000576708 UBXN2BQ14CS0 331 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 RABEP1Q15276 862 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 MLF2Q15773 248 aaPredicted RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 UVSSAQ2YD98 709 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 CTXN3Q4LDR2 81 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 TMEM119Q4V9L6 283 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 SLC44A4Q53GD3 710 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 ZC3H12AQ5D1E8 599 aaKnown RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 RILPL1Q5EBL4 403 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 PPM1JQ5JR12 505 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 WIPI1Q5MNZ9 446 aaPredicted RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 HYIQ5T013 277 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 TANGO2Q6ICL3 276 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 SLC8B1Q6J4K2 584 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 FBXL19Q6PCT2 694 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 MAML2Q8IZL2 1156 aaPredicted RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 PJA1Q8NG27 643 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 ZNF461Q8TAF7 563 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 KCNG4Q8TDN1 519 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 FBLIM1Q8WUP2 373 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 ELMO3Q96BJ8 720 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 PLPPR2Q96GM1 343 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 ZSWIM3Q96MP5 696 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 TBC1D32Q96NH3 1257 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 NTPCRQ9BSD7 190 aaKnown RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 IKZF4Q9H2S9 585 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 SLC38A7Q9NVC3 462 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 INSL5Q9Y5Q6 135 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 ZFP37Q9Y6Q3 630 aaPredicted RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 MYH15Q9Y2K3 1946 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 MYO15AQ9UKN7 3530 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 KANSL1LA0AUZ9 987 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 ARHGEF37A1IGU5 675 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 SHISA7A6NL88 538 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 FAM170BA6NMN3 283 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 LACTBL1A8MY62 500 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 TISP43B9A030 160 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 H7C4K7 107 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 CLDN3O15551 220 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 MOSPD3O75425 235 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 TOM1L1O75674 476 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 LRG1P02750 347 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 POU2F2P09086 479 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 SP9P0CG40 484 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 MYL4P12829 197 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 ATF2P15336 505 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 GARTP22102 1010 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 FCARP24071 287 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 ELF1P32519 619 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 RPL9P32969 192 aaKnown RBP6.76□□□□□ -1.33
NUP88-212ENST00000576708 NCKAP1LP55160 1127 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 MCL1Q07820 350 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 ADCY1Q08828 1119 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 TWF1Q12792 350 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 FAM78AQ5JUQ0 283 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 PRSS36Q5K4E3 855 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 USP49Q70CQ1 688 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 MTSS1LQ765P7 747 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 HAUS6Q7Z4H7 955 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 GPBP1Q86WP2 473 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 C1orf210Q8IVY1 113 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 TCEAL8Q8IYN2 117 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 DCLK2Q8N568 766 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 FBXO27Q8NI29 283 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 BICD1Q96G01 975 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 CDK5RAP3Q96JB5 506 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 MYRFLQ96LU7 910 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 PGLYRP2Q96PD5 576 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 TMEM209Q96SK2 561 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 REEP2Q9BRK0 252 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 KCNF1Q9H3M0 494 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 ZHX3Q9H4I2 956 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 C17orf75Q9HAS0 396 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 HEBP1Q9NRV9 189 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 BLOC1S4Q9NUP1 217 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 CEP72Q9P209 647 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 KCNH3Q9ULD8 1083 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 SMC3Q9UQE7 1217 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 NCANO14594 1321 aa6.76□□□□□ -1.33
NUP88-212ENST00000576708 TTC26A0AVF1 554 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 PRAMEF27A3QJZ7 478 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms