RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 USTQ9Y2C2 406 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 CALCAP01258 141 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHD9-219ENST00000569225 GABRR2P28476 465 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ACADSBP45954 432 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 NTHL1P78549 312 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 CDR2Q01850 454 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 MTMR3Q13615 1198 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 PRSS36Q5K4E3 855 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 DENND1BQ6P3S1 775 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 GET4Q7L5D6 327 aaPredicted RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 NOP9Q86U38 636 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 ARHGAP18Q8N392 663 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 TDRD5Q8NAT2 981 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 TMEM35BQ8NCS4 154 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 CPLX3Q8WVH0 158 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 KCTD13Q8WZ19 329 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 FBXO32Q969P5 355 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 HSFY1Q96LI6 401 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 LRRC3Q9BY71 257 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ZNF334Q9HCZ1 680 aaPredicted RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 GDE1Q9NZC3 331 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 AIPL1Q9NZN9 384 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 NOCTQ9UK39 431 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 BZW2Q9Y6E2 419 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 NCANO14594 1321 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 PLXNA3P51805 1871 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 A0A1W2PRU2 124 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 GOLGA6L3A6NEY3 463 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 HHLA1C9JL84 531 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
CHD9-219ENST00000569225 FBXO21O94952 628 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 GYPCP04921 128 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 GBP2P32456 591 aaPredicted RBP9.61□□□□□ -0.87
CHD9-219ENST00000569225 GPD2P43304 727 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 KCNQ1P51787 676 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 TKTL1P51854 596 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 KIF11P52732 1056 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 USP46P62068 366 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 TAF10Q12962 218 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 TAF3Q5VWG9 929 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 PASD1Q8IV76 773 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 CNGA4Q8IV77 575 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHD9-219ENST00000569225 STKLD1Q8NE28 680 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 SCAMP5Q8TAC9 235 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
CHD9-219ENST00000569225 SLC35F5Q8WV83 523 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 MIS12Q9H081 205 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 SLITRK6Q9H5Y7 841 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 SYNCQ9H7C4 482 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 ZNHIT6Q9NWK9 470 aaKnown RBP9.61□□□□□ -0.87
CHD9-219ENST00000569225 IL37Q9NZH6 218 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 CDH22Q9UJ99 828 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 CDH7Q9ULB5 785 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 SCML2Q9UQR0 700 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 BRWD1Q9NSI6 2320 aa9.61□□□□□ -0.87
CHD9-219ENST00000569225 FAM92AA1XBS5 289 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 AP5Z1O43299 807 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 ZBED1O96006 694 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 F11P03951 625 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 IL9P15248 144 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 PFKLP17858 780 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 CASP14P31944 242 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 SSTR3P32745 418 aaPredicted RBP9.6□□□□□ -0.87
CHD9-219ENST00000569225 PSEN1P49768 467 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 KLHL30Q0D2K2 578 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 PDCLQ13371 301 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 SLC5A9Q2M3M2 681 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 RAB41Q5JT25 222 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 PPP1R2P3Q6NXS1 205 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 GAREM2Q75VX8 874 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 CCDC186Q7Z3E2 898 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 VPS36Q86VN1 386 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 ADHFE1Q8IWW8 467 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 ITFG1Q8TB96 612 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 SHKBP1Q8TBC3 707 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 DDX1Q92499 740 aaKnown RBP9.6□□□□□ -0.87
CHD9-219ENST00000569225 GOLGA1Q92805 767 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 FGF13Q92913 245 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 AGPAT1Q99943 283 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 CNGB3Q9NQW8 809 aa9.6□□□□□ -0.87
CHD9-219ENST00000569225 TLR8Q9NR97 1041 aaKnown RBP9.6□□□□□ -0.87
CHD9-219ENST00000569225 SEPT11Q9NVA2 429 aaKnown RBP9.6□□□□□ -0.87
CHD9-219ENST00000569225 GOLGA6L6A8MZA4 724 aa9.59□□□□□ -0.87
CHD9-219ENST00000569225 TULP2O00295 520 aa9.59□□□□□ -0.87
CHD9-219ENST00000569225 MMEP08473 750 aa9.59□□□□□ -0.87
CHD9-219ENST00000569225 LCP1P13796 627 aa9.59□□□□□ -0.87
CHD9-219ENST00000569225 CEBPBP17676 345 aa9.59□□□□□ -0.87
CHD9-219ENST00000569225 CCR2P41597 374 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms