RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 HNRNPABQ99729 332 aaKnown RBP11.72□□□□□ -0.53
LINC01228-201ENST00000567966 STK33Q9BYT3 514 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 EDEM3Q9BZQ6 932 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 ELOVL4Q9GZR5 314 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 AVENQ9NQS1 362 aaPredicted RBP11.72□□□□□ -0.53
LINC01228-201ENST00000567966 EHD2Q9NZN4 543 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 IMPACTQ9P2X3 320 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 SIT1Q9Y3P8 196 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 MIA3Q5JRA6 1907 aa11.72□□□□□ -0.53
LINC01228-201ENST00000567966 NCANO14594 1321 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 ATP2C2O75185 946 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 MICAL2O94851 1124 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 FGF19O95750 216 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 VDRP11473 427 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 UCHL3P15374 230 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 CD58P19256 250 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 RAP1GAPP47736 663 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 RAD23BP54727 409 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 GSDMDP57764 484 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 FANCCQ00597 558 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 MLF2Q15773 248 aaPredicted RBP11.71□□□□□ -0.53
LINC01228-201ENST00000567966 SLC44A4Q53GD3 710 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 ARHGAP17Q68EM7 881 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 IQCEQ6IPM2 695 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 RRAGAQ7L523 313 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 ITIH5Q86UX2 942 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 TTC9BQ8N6N2 239 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 PJA1Q8NG27 643 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 SHC3Q92529 594 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 CYFIP2Q96F07 1278 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 PCED1BQ96HM7 432 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 SPATA17Q96L03 361 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 C8orf48Q96LL4 319 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 ZNF512Q96ME7 567 aaPredicted RBP11.71□□□□□ -0.53
LINC01228-201ENST00000567966 KREMEN1Q96MU8 473 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
LINC01228-201ENST00000567966 SIX2Q9NPC8 291 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC01228-201ENST00000567966 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
LINC01228-201ENST00000567966 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
LINC01228-201ENST00000567966 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.54
LINC01228-201ENST00000567966 SCN1AP35498 2009 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 COL4A2P08572 1712 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 KANSL1LA0AUZ9 987 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ZNF197O14709 1029 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 TRIM66O15016 1216 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ECI2O75521 394 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SOAT2O75908 522 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 MYL4P12829 197 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ZNF132P52740 706 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 UBASH3AP57075 661 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SLC8A3P57103 927 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 GRM2Q14416 872 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 VEPH1Q14D04 833 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SYCP1Q15431 976 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 CNGA2Q16280 664 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 MEA1Q16626 185 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 MDH1BQ5I0G3 518 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 FAM78AQ5JUQ0 283 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 TMEM270Q6UE05 265 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ARHGEF19Q8IW93 802 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SLC4A11Q8NBS3 891 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 NEK11Q8NG66 645 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ELMO3Q96BJ8 720 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 NAP1L5Q96NT1 182 aaPredicted RBP11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ARID3AQ99856 593 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
LINC01228-201ENST00000567966 NUP58Q9BVL2 599 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 LRRC3Q9BY71 257 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 B3GNT5Q9BYG0 378 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 CSNK1G1Q9HCP0 422 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 TMLHEQ9NVH6 421 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 COMMD8Q9NX08 183 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 ABI2Q9NYB9 513 aaPredicted RBP11.7□□□□□ -0.54
LINC01228-201ENST00000567966 GDE1Q9NZC3 331 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 YIPF1Q9Y548 306 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 NME7Q9Y5B8 376 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 R4GN57 208 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 PATJQ8NI35 1801 aa11.7□□□□□ -0.54
LINC01228-201ENST00000567966 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 NRDCO43847 1150 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 CSH1P0DML2 217 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 CSH2P0DML3 217 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 BDNFP23560 247 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 CYP2F1P24903 491 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 VIPR2P41587 438 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 EPHA5P54756 1037 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
LINC01228-201ENST00000567966 CYP27A1Q02318 531 aa11.69□□□□□ -0.54
LINC01228-201ENST00000567966 PTK2Q05397 1052 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms