RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 SLITRK1Q96PX8 696 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 P2RY13Q9BPV8 354 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 RNF38Q9H0F5 515 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 SMYD3Q9H7B4 428 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 IL37Q9NZH6 218 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 RAB23Q9ULC3 237 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 WNT6Q9Y6F9 365 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 CACNA1AO00555 2505 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 LEFTY2O00292 366 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 TNFRSF10BO14763 440 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 LRP3O75074 770 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 RTN3O95197 1032 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-216ENST00000567023 ASS1P00966 412 aaKnown RBP15.14■□□□□ 0.01
COMMD4-216ENST00000567023 EGFP01133 1207 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 P4HA1P13674 534 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 NR1H3Q13133 447 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 SIM2Q14190 667 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-216ENST00000567023 SNX30Q5VWJ9 437 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 PKN3Q6P5Z2 889 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 KRBA2Q6ZNG9 492 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 CRYBG2Q8N1P7 616 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 GUF1Q8N442 669 aaKnown RBP15.14■□□□□ 0.01
COMMD4-216ENST00000567023 CCDC47Q96A33 483 aaKnown RBP15.14■□□□□ 0.01
COMMD4-216ENST00000567023 KCNK16Q96T55 309 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 LINC00597Q9H2U6 94 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 GMEB2Q9UKD1 530 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 CEP250Q9BV73 2442 aa15.14■□□□□ 0.01
COMMD4-216ENST00000567023 FAM92AA1XBS5 289 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 RNF40O75150 1001 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 ZNF202O95125 648 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 NFATC1O95644 943 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 RETP07949 1114 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 SDHBP21912 280 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 YWHAQP27348 245 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 RAP1GAPP47736 663 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 VAMP7P51809 220 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 INTS8Q75QN2 995 aaKnown RBP15.13■□□□□ 0.01
COMMD4-216ENST00000567023 FAM35AQ86V20 835 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 UNC93AQ86WB7 457 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 ADGRG2Q8IZP9 1017 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 FUKQ8N0W3 1084 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 CAMKK1Q8N5S9 505 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 PDZD8Q8NEN9 1154 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 CD101Q93033 1021 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 SMARCD1Q96GM5 515 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 CSNK1G1Q9HCP0 422 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 COMMD8Q9NX08 183 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 HELZP42694 1942 aaKnown RBP15.13■□□□□ 0.01
COMMD4-216ENST00000567023 ATP8B3O60423 1300 aa15.13■□□□□ 0.01
COMMD4-216ENST00000567023 PRR5-ARHGAP8B1AHC4 643 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 AKAP3O75969 853 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 NR2F2P24468 414 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 RPL13P26373 211 aaKnown RBP15.12■□□□□ 0.01
COMMD4-216ENST00000567023 HOXC13P31276 330 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 ASPAP45381 313 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 ARHGAP8P85298 464 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 LMNB2Q03252 620 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 ZCWPW2Q504Y3 356 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-216ENST00000567023 CCDC26Q8TAB7 109 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 EZH1Q92800 747 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-216ENST00000567023 ELMO3Q96BJ8 720 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 DUSP9Q99956 384 aaKnown RBP15.12■□□□□ 0.01
COMMD4-216ENST00000567023 GOLPH3LQ9H4A5 285 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 PARD6AQ9NPB6 346 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 DMAP1Q9NPF5 467 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-216ENST00000567023 CPQQ9Y646 472 aa15.12■□□□□ 0.01
COMMD4-216ENST00000567023 SLC9A3R1O14745 358 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-216ENST00000567023 ABL1P00519 1130 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 HLA-DRAP01903 254 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 ZDHHC11BP0C7U3 371 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 TUBP50607 506 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 NDST1P52848 882 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 SLC5A3P53794 718 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 INCA1Q0VD86 236 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 SRSF5Q13243 272 aaKnown RBP15.11■□□□□ 0.01
COMMD4-216ENST00000567023 LPAL2Q16609 132 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 RSPO4Q2I0M5 234 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-216ENST00000567023 GAB4Q2WGN9 574 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 HEATR6Q6AI08 1181 aaKnown RBP15.11■□□□□ 0.01
COMMD4-216ENST00000567023 SCARA5Q6ZMJ2 495 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 SYT13Q7L8C5 426 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 ACOT1Q86TX2 421 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 DDX42Q86XP3 938 aaKnown RBP eCLIP15.11■□□□□ 0.01
COMMD4-216ENST00000567023 TTC16Q8NEE8 873 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 SCAMP5Q8TAC9 235 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 MED10Q9BTT4 135 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 CHORDC1Q9UHD1 332 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-216ENST00000567023 SLC8A2Q9UPR5 921 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 MAPK8IP1Q9UQF2 711 aa15.11■□□□□ 0.01
COMMD4-216ENST00000567023 AP1G2O75843 785 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 PSMC2P35998 433 aaKnown RBP15.1■□□□□ 0.01
COMMD4-216ENST00000567023 OPRD1P41143 372 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 EIF2DP41214 584 aaKnown RBP15.1■□□□□ 0.01
COMMD4-216ENST00000567023 PIK3CAP42336 1068 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms