RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 MPP5Q8N3R9 675 aa4.24□□□□□ -1.73
PALB2-204ENST00000566069 OR56A3Q8NH54 315 aa4.24□□□□□ -1.73
PALB2-204ENST00000566069 ZC3H10Q96K80 434 aaKnown RBP4.24□□□□□ -1.73
PALB2-204ENST00000566069 STRBPQ96SI9 672 aaKnown RBP4.24□□□□□ -1.73
PALB2-204ENST00000566069 NELL2Q99435 816 aa4.24□□□□□ -1.73
PALB2-204ENST00000566069 MS4A7Q9GZW8 240 aaPredicted RBP4.24□□□□□ -1.73
PALB2-204ENST00000566069 PNPLA8Q9NP80 782 aa4.24□□□□□ -1.73
PALB2-204ENST00000566069 PADI4Q9UM07 663 aa4.24□□□□□ -1.73
PALB2-204ENST00000566069 SNX13Q9Y5W8 968 aa4.24□□□□□ -1.73
PALB2-204ENST00000566069 CCDC194A0A1B0GVG4 234 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 TMEM233B4DJY2 109 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 PYCARD-AS1I3L0S3 204 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 PPP3CBP16298 524 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 EPHB2P29323 1055 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 LRPAP1P30533 357 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 ITIH3Q06033 890 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 DAG1Q14118 895 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 MGAT5BQ3V5L5 792 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 SUPT20HL1Q3ZLR7 823 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 MAP9Q49MG5 647 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 RBM20Q5T481 1227 aaKnown RBP4.23□□□□□ -1.73
PALB2-204ENST00000566069 SLC9A4Q6AI14 798 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 YTHDF3Q7Z739 585 aaKnown RBP4.23□□□□□ -1.73
PALB2-204ENST00000566069 B3GALNT2Q8NCR0 500 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 RFKQ969G6 155 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 SPSB4Q96A44 273 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 PTDSS2Q9BVG9 487 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 SEMA4CQ9C0C4 833 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 KLC4Q9NSK0 619 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 CORO2BQ9UQ03 480 aa4.23□□□□□ -1.73
PALB2-204ENST00000566069 ADGRA2Q96PE1 1338 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 TARM1B6A8C7 271 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 GCOM1H8Y6P7 765 aaPredicted RBP4.22□□□□□ -1.73
PALB2-204ENST00000566069 IL18RAPO95256 599 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 TOP3BO95985 862 aaKnown RBP4.22□□□□□ -1.73
PALB2-204ENST00000566069 PIK3CBP42338 1070 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 TM4SF4P48230 202 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 CASP5P51878 434 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 NXPH1P58417 271 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 KRT17Q04695 432 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 ZNF543Q08ER8 600 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 CEP78Q5JTW2 689 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 VPS53Q5VIR6 699 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 ICE2Q659A1 982 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 SPATA3Q8NHX4 192 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 FAM136AQ96C01 138 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 PPP1R9BQ96SB3 815 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 SH2D3AQ9BRG2 576 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 NAA15Q9BXJ9 866 aaKnown RBP4.22□□□□□ -1.73
PALB2-204ENST00000566069 AMBRA1Q9C0C7 1298 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 SPRTNQ9H040 489 aaPredicted RBP4.22□□□□□ -1.73
PALB2-204ENST00000566069 ZNF700Q9H0M5 742 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 ZSCAN32Q9NX65 697 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 TTC3P53804 2025 aa4.22□□□□□ -1.73
PALB2-204ENST00000566069 F8W8V4 182 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 PPEF2O14830 753 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 KPNA5O15131 536 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 CCP110O43303 1012 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 HNRNPCP07910 306 aaKnown RBP eCLIP4.21□□□□□ -1.74
PALB2-204ENST00000566069 CBSLP0DN79 551 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 TXNP10599 105 aaKnown RBP4.21□□□□□ -1.74
PALB2-204ENST00000566069 IL1R1P14778 569 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 DRD4P21917 467 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 CBSP35520 551 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 NR4A2P43354 598 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 CARSP49589 748 aaKnown RBP4.21□□□□□ -1.74
PALB2-204ENST00000566069 PRIM2P49643 509 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 CCT4P50991 539 aaKnown RBP4.21□□□□□ -1.74
PALB2-204ENST00000566069 MYO1EQ12965 1108 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 E2F2Q14209 437 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 INSCQ1MX18 579 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 PROSER3Q2NL68 480 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 FAM153CQ494X1 144 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 PLA1AQ53H76 456 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 TEDDM1Q5T9Z0 273 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 ARHGAP40Q5TG30 622 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 IL31Q6EBC2 164 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 SUMO4Q6EEV6 95 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 DENND1AQ8TEH3 1009 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 RAPGEF4Q8WZA2 1011 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 TBCBQ99426 244 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 STK31Q9BXU1 1019 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 ACTRT3Q9BYD9 372 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 TPSD1Q9BZJ3 242 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 DHX36Q9H2U1 1008 aaKnown RBP4.21□□□□□ -1.74
PALB2-204ENST00000566069 SERHLQ9NQF3 203 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 XPNPEP3Q9NQH7 507 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
PALB2-204ENST00000566069 PHTF1Q9UMS5 762 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 TBC1D30Q9Y2I9 924 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 CNTNAP2Q9UHC6 1331 aa4.21□□□□□ -1.74
PALB2-204ENST00000566069 TCF20Q9UGU0 1960 aaKnown RBP4.2□□□□□ -1.74
PALB2-204ENST00000566069 LOC102723971A0A1B0GUV8 181 aa4.2□□□□□ -1.74
PALB2-204ENST00000566069 TISP43B9A030 160 aa4.2□□□□□ -1.74
PALB2-204ENST00000566069 RASA4BC9J798 803 aa4.2□□□□□ -1.74
PALB2-204ENST00000566069 RASA4O43374 803 aa4.2□□□□□ -1.74
PALB2-204ENST00000566069 RASSF9O75901 435 aa4.2□□□□□ -1.74
PALB2-204ENST00000566069 INMTO95050 263 aa4.2□□□□□ -1.74
PALB2-204ENST00000566069 MT-ND5P03915 603 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms