RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 A0A1W2PQF6 199 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 C2orf78A6NCI8 922 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 PIRO00625 290 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 PPEF2O14830 753 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 CDKL5O76039 1030 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 C1SP09871 688 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 ADH5P11766 374 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 WASP42768 502 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 GPR15P49685 360 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 GUCY2FP51841 1108 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 SMTNP53814 917 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 UCNP55089 124 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 GAD2Q05329 585 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 KDSRQ06136 332 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 CCDC173Q0VFZ6 552 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 MESP2Q0VG99 397 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 MYO1EQ12965 1108 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 SF3A1Q15459 793 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 INAVAQ3KP66 663 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 EARS2Q5JPH6 523 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 SDHAF4Q5VUM1 108 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 C9orf57Q5W0N0 161 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 ZPBP2Q6X784 338 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 CD302Q8IX05 232 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 ZCCHC9Q8N567 271 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 IPO4Q8TEX9 1081 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 TOE1Q96GM8 510 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 PYM1Q9BRP8 204 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 NTPCRQ9BSD7 190 aaKnown RBP9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 BHMT2Q9H2M3 363 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 ABCB6Q9NP58 842 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 LIMCH1Q9UPQ0 1083 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 BTBD3Q9Y2F9 522 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 STARD13Q9Y3M8 1113 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 PCDHB6Q9Y5E3 794 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 PCDHGA1Q9Y5H4 931 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 PTPRQQ9UMZ3 2332 aa9.71□□□□□ -0.86
VPS9D1-205ENST00000565452 METTL12A8MUP2 240 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 BTBD18B2RXH4 712 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 SLC16A4O15374 487 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 TADA3O75528 432 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 NCAM1P13591 858 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 NDUFV2P19404 249 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 CYP2F1P24903 491 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 OXTRP30559 389 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 KRT2P35908 639 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 TNFSF9P41273 254 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 PPP3CCP48454 512 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 TARDBPQ13148 414 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 COLEC12Q5KU26 742 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 WSCD1Q658N2 575 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 SPACA3Q8IXA5 215 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 CHPFQ8IZ52 775 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 MED8Q96G25 268 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 GPR174Q9BXC1 333 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 WSB2Q9NYS7 404 aaPredicted RBP9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 TRPM5Q9NZQ8 1165 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 FTSJ1Q9UET6 329 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 ADAMTS9Q9P2N4 1935 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 PCDH15Q96QU1 1955 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 COL6A6A6NMZ7 2263 aa9.7□□□□□ -0.86
VPS9D1-205ENST00000565452 ANO9A1A5B4 782 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 PCDHGA12O60330 932 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 PFKFB2O60825 505 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 ADRB2P07550 413 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 PTPRBP23467 1997 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 ADSSP30520 456 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 CSNK1EP49674 416 aaKnown RBP9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 TAF6P49848 677 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 AFF3P51826 1226 aaKnown RBP9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 TMPRSS3P57727 454 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 SLC7A9P82251 487 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 BNC1Q01954 994 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 NR5A1Q13285 461 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 LY6DQ14210 128 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 TEAD4Q15561 434 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 C10orf76Q5T2E6 689 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 DCAF12L1Q5VU92 463 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 KIAA1324Q6UXG2 1013 aaKnown RBP9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 C12orf40Q86WS4 652 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 NAT16Q8N8M0 369 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 LEO1Q8WVC0 666 aaPredicted RBP9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 WASF1Q92558 559 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 OTUB2Q96DC9 234 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 MRGPRX1Q96LB2 322 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 ACBD6Q9BR61 282 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 SEMA4CQ9C0C4 833 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 ITM2CQ9NQX7 267 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 TMLHEQ9NVH6 421 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 EHD2Q9NZN4 543 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 GMIPQ9P107 970 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms