RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 PRO3102Q9H379 93 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 CHST7Q9NS84 486 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 CXXC1Q9P0U4 656 aaPredicted RBP12.21□□□□□ -0.46
PCAT1-202ENST00000561978 POLIQ9UNA4 740 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 FGBP02675 491 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 CXCL10P02778 98 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 RPLP2P05387 115 aaKnown RBP12.2□□□□□ -0.46
PCAT1-202ENST00000561978 VDRP11473 427 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 KRT3P12035 628 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 ATF2P15336 505 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 FGFR4P22455 802 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 RFC2P35250 354 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 RAD23BP54727 409 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 HADHQ16836 314 aaKnown RBP12.2□□□□□ -0.46
PCAT1-202ENST00000561978 DRICH1Q6PGQ1 229 aaPredicted RBP12.2□□□□□ -0.46
PCAT1-202ENST00000561978 POLNQ7Z5Q5 900 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 TMEM192Q8IY95 271 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 HEMGNQ9BXL5 484 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 FOXP3Q9BZS1 431 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
PCAT1-202ENST00000561978 SYNCQ9H7C4 482 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
PCAT1-202ENST00000561978 ROPN1Q9HAT0 212 aaPredicted RBP12.2□□□□□ -0.46
PCAT1-202ENST00000561978 PLEKHA5Q9HAU0 1116 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 DERAQ9Y315 318 aa12.2□□□□□ -0.46
PCAT1-202ENST00000561978 ZBBXA8MT70 800 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 TSPAN1O60635 241 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 CILPO75339 1184 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 KRT7P08729 469 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 ADCY8P40145 1251 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 GRM5P41594 1212 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 CRYBB1P53674 252 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PPP2R2AP63151 447 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 SLC29A2Q14542 456 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 ACAP1Q15027 740 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 CNGA2Q16280 664 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PLEKHG4Q58EX7 1191 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 DENND1BQ6P3S1 775 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PSRC1Q6PGN9 363 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 ARMCX6Q7L4S7 300 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 TDHQ8IZJ6 230 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 CPB2Q96IY4 423 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 SLITRK1Q96PX8 696 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 EPN3Q9H201 632 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 ANAPC5Q9UJX4 755 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PADI3Q9ULW8 664 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 NOVA2Q9UNW9 492 aaKnown RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 DRG1Q9Y295 367 aaKnown RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 MICAL3Q7RTP6 2002 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PRUNE2Q8WUY3 3088 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 SPTBN5Q9NRC6 3674 aaKnown RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 RIPK2O43353 540 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 KRT1P04264 644 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PFKMP08237 780 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 HPDP32754 393 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 LSP1P33241 339 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 BMP8BP34820 402 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 MYO1EQ12965 1108 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 PDCLQ13371 301 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 LLGL1Q15334 1064 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 STILQ15468 1287 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 TFDP3Q5H9I0 405 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 CXorf38Q8TB03 319 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 FRMD8P1Q9BZ68 369 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 EPB41L4BQ9H329 900 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 SEMA4AQ9H3S1 761 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 DPP3Q9NY33 737 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 BARX2Q9UMQ3 279 aaPredicted RBP12.19□□□□□ -0.46
PCAT1-202ENST00000561978 AGAP1Q9UPQ3 857 aa12.19□□□□□ -0.46
PCAT1-202ENST00000561978 F8VP50 259 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 EBAG9O00559 213 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 COL6A3P12111 3177 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 DARSP14868 501 aaKnown RBP12.18□□□□□ -0.46
PCAT1-202ENST00000561978 PSMA2P25787 234 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 GJC1P36383 396 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 GABRB2P47870 512 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 CDH8P55286 799 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 PSMC1P62191 440 aaKnown RBP12.18□□□□□ -0.46
PCAT1-202ENST00000561978 RHBDF2Q6PJF5 856 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 FAM228AQ86W67 206 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 SPATS2Q86XZ4 545 aaKnown RBP12.18□□□□□ -0.46
PCAT1-202ENST00000561978 TLCD1Q96CP7 247 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
PCAT1-202ENST00000561978 RSPH14Q9UHP6 348 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 ST3GAL5Q9UNP4 418 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 R3HDM2Q9Y2K5 976 aaKnown RBP12.18□□□□□ -0.46
PCAT1-202ENST00000561978 O00370 1275 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 RGS16O15492 202 aaPredicted RBP12.18□□□□□ -0.46
PCAT1-202ENST00000561978 GJB6O95452 261 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 AGTP01019 485 aa12.18□□□□□ -0.46
PCAT1-202ENST00000561978 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms