RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 BLOC1S2Q6QNY1 142 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 DBX2Q6ZNG2 339 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 CATSPER3Q86XQ3 398 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 CHPFQ8IZ52 775 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.77
HERC1-210ENST00000560897 DNASE2BQ8WZ79 361 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 TRMT2BQ96GJ1 504 aaKnown RBP10.27□□□□□ -0.77
HERC1-210ENST00000560897 MTMR9Q96QG7 549 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 TRIM4Q9C037 500 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 KMT5AQ9NQR1 393 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 PCDHGA1Q9Y5H4 931 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 ANAPC1Q9H1A4 1944 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 KNL1Q8NG31 2342 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 A0A0A0MRY4 1105 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 C2orf78A6NCI8 922 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 LEFTY2O00292 366 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 CLDN3O15551 220 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 BRINP1O60477 761 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 NEMFO60524 1076 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 TOM1L1O75674 476 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 RFPL3O75679 317 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 NOL4O94818 638 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 CYP11A1P05108 521 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 CLTAP09496 248 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 CPA1P15085 419 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 GUCY2FP51841 1108 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 TARDBPQ13148 414 aaKnown RBP eCLIP10.26□□□□□ -0.77
HERC1-210ENST00000560897 TEAD4Q15561 434 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 C6orf132Q5T0Z8 1188 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 HES3Q5TGS1 186 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 DCAF12L1Q5VU92 463 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 ZNF574Q6ZN55 896 aaPredicted RBP10.26□□□□□ -0.77
HERC1-210ENST00000560897 C12orf40Q86WS4 652 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 RASEFQ8IZ41 740 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 TMEM130Q8N3G9 435 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 KIAA1958Q8N8K9 716 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 ZNF248Q8NDW4 579 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 SNX19Q92543 992 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 ERLEC1Q96DZ1 483 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 PYM1Q9BRP8 204 aaKnown RBP10.26□□□□□ -0.77
HERC1-210ENST00000560897 GPR174Q9BXC1 333 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 POLD4Q9HCU8 107 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 BRMS1Q9HCU9 246 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 GMIPQ9P107 970 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 GCNT4Q9P109 453 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 ANKMY1Q9P2S6 941 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 DEC1Q9P2X7 70 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 RBM19Q9Y4C8 960 aaKnown RBP10.26□□□□□ -0.77
HERC1-210ENST00000560897 PCDHB6Q9Y5E3 794 aa10.26□□□□□ -0.77
HERC1-210ENST00000560897 AHCTF1Q8WYP5 2266 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 A0A1B0GVT2 93 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 ENO4A6NNW6 628 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 CYB561D2O14569 222 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 MED24O75448 989 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 SPATA31C1P0DKV0 1188 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 PFKLP17858 780 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 NPTX2P47972 431 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 AFF3P51826 1226 aaKnown RBP10.25□□□□□ -0.77
HERC1-210ENST00000560897 PCBP4P57723 403 aaKnown RBP10.25□□□□□ -0.77
HERC1-210ENST00000560897 GAD2Q05329 585 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 MESP2Q0VG99 397 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 DDR2Q16832 855 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 TBC1D25Q3MII6 688 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 LRRTM3Q86VH5 581 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 CADM4Q8NFZ8 388 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 TOE1Q96GM8 510 aaKnown RBP10.25□□□□□ -0.77
HERC1-210ENST00000560897 NAF1Q96HR8 494 aaKnown RBP10.25□□□□□ -0.77
HERC1-210ENST00000560897 ZBTB45Q96K62 511 aaPredicted RBP10.25□□□□□ -0.77
HERC1-210ENST00000560897 MYRFLQ96LU7 910 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 JAKMIP1Q96N16 626 aaKnown RBP10.25□□□□□ -0.77
HERC1-210ENST00000560897 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 TSPAN18Q96SJ8 248 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 CPNE5Q9HCH3 593 aa10.25□□□□□ -0.77
HERC1-210ENST00000560897 COL12A1Q99715 3063 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 A0A1W2PQF6 199 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 TTC26A0AVF1 554 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 E2F8A0AVK6 867 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 LAD1O00515 517 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 ABLIM1O14639 778 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 PPEF2O14830 753 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 PCDHGA12O60330 932 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 C1SP09871 688 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 CHRM1P11229 460 aaPredicted RBP10.24□□□□□ -0.77
HERC1-210ENST00000560897 GP1BBP13224 206 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 PDIA3P30101 505 aaKnown RBP10.24□□□□□ -0.77
HERC1-210ENST00000560897 OXTRP30559 389 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 TAF6P49848 677 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 STARD3Q14849 445 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 KYAT1Q16773 422 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 RHBDF2Q6PJF5 856 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 DDX42Q86XP3 938 aaKnown RBP eCLIP10.24□□□□□ -0.77
HERC1-210ENST00000560897 NAT16Q8N8M0 369 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 TERB1Q8NA31 727 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 SCFD1Q8WVM8 642 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 FAM212AQ96EL1 285 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 BICD1Q96G01 975 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 BHMT2Q9H2M3 363 aa10.24□□□□□ -0.77
HERC1-210ENST00000560897 ABCB6Q9NP58 842 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms