RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 CAPN10Q9HC96 672 aa7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 GKN1Q9NS71 199 aa7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 KIAA1522Q9P206 1035 aaPredicted RBP7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 FBXL5Q9UKA1 691 aa7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 PILRBQ9UKJ0 227 aa7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 YIPF1Q9Y548 306 aa7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 SPTAN1Q13813 2472 aaKnown RBP7.39□□□□□ -1.23
SPTLC2-206ENST00000557566 TBX3O15119 743 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 AP5Z1O43299 807 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 FZD6O60353 706 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 ALDH1A2O94788 518 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 PRAMEF12O95522 483 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 CPB1P15086 417 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 ITPKAP23677 461 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 IGFBP6P24592 240 aaPredicted RBP7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 GNA11P29992 359 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 GSK3AP49840 483 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 USP11P51784 963 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 EPHB3P54753 998 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 CYP4A11Q02928 519 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 PTH1RQ03431 593 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 TYRO3Q06418 890 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 BYSLQ13895 437 aaKnown RBP7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 LBRQ14739 615 aaKnown RBP7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 UPP1Q16831 310 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 CTXN3Q4LDR2 81 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 GPR158Q5T848 1215 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 ZNF280DQ6N043 979 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 B3GNT9Q6UX72 402 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 OTUD6AQ7L8S5 288 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 GLRX5Q86SX6 157 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 SLCO6A1Q86UG4 719 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 TTC30AQ86WT1 665 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 KRT222Q8N1A0 295 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 GALNT15Q8N3T1 639 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 C3orf58Q8NDZ4 430 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 MDGA1Q8NFP4 955 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 OLIG1Q8TAK6 271 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 BICD2Q8TD16 824 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 FOXD4L4Q8WXT5 416 aaPredicted RBP7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 CHFRQ96EP1 664 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 FNBP1Q96RU3 617 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 FAM83CQ9BQN1 747 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 LRRC3Q9BY71 257 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 CLSTN2Q9H4D0 955 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 EBF3Q9H4W6 596 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 FBRSL1Q9HCM7 1045 aaKnown RBP7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 HPS4Q9NQG7 708 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 FSCN3Q9NQT6 498 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 CYP46A1Q9Y6A2 500 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 DENND4CQ5VZ89 1909 aa7.38□□□□□ -1.23
SPTLC2-206ENST00000557566 KNTC1P50748 2209 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 OTOL1A6NHN0 477 aaPredicted RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 N4BP3O15049 544 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 NDUFB5O43674 189 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 MARCH6O60337 910 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 WISP1O95388 367 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 P4HBP07237 508 aaKnown RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 VSIG8P0DPA2 414 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 TNNT1P13805 278 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 U2AF2P26368 475 aaKnown RBP eCLIP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 ITPKBP27987 946 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 PSMA5P28066 241 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 GABRR2P28476 465 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 GJB2P29033 226 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 YWHABP31946 246 aaKnown RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 P2RY2P41231 377 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 ALDH1A3P47895 512 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 CAPSQ13938 189 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 MRPL58Q14197 206 aaKnown RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 TERF2Q15554 542 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 PFKFB3Q16875 520 aaPredicted RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 Q4G0T1 1027 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 XKR9Q5GH70 373 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 GLRA4Q5JXX5 417 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 TRIM68Q6AZZ1 485 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 ATL3Q6DD88 541 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 CC2D1AQ6P1N0 951 aaPredicted RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 FIGNL1Q6PIW4 674 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 CD300LGQ6UXG3 332 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 GAREM2Q75VX8 874 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 GPR155Q7Z3F1 870 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 SGMS1Q86VZ5 419 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 TREML1Q86YW5 311 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 OR2I1PQ8NGU4 316 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 KIF18AQ8NI77 898 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 WHAMMQ8TF30 809 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 RLN3Q8WXF3 142 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 CD101Q93033 1021 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 PPP1R10Q96QC0 940 aaKnown RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 ADPGKQ9BRR6 497 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 POLR3CQ9BUI4 534 aaPredicted RBP7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 CXCL16Q9H2A7 254 aa7.37□□□□□ -1.23
SPTLC2-206ENST00000557566 TASP1Q9H6P5 420 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms