RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 EHD2Q9NZN4 543 aa11.01□□□□□ -0.65
TMEM55B-205ENST00000554028 AFF4Q9UHB7 1163 aaKnown RBP11.01□□□□□ -0.65
TMEM55B-205ENST00000554028 ANAPC7Q9UJX3 599 aa11.01□□□□□ -0.65
TMEM55B-205ENST00000554028 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
TMEM55B-205ENST00000554028 JRKLQ9Y4A0 524 aa11.01□□□□□ -0.65
TMEM55B-205ENST00000554028 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
TMEM55B-205ENST00000554028 FNDC1Q4ZHG4 1894 aaPredicted RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 PDE4DIPQ5VU43 2346 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 MTMR11A4FU01 709 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 TMEM110-MUSTN1A8MSY1 372 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 GRXCR1A8MXD5 290 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 C5orf67F2Z3F1 127 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 F8VP50 259 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 TULP2O00295 520 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 PIK3R2O00459 728 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 PALMO75781 387 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ABL1P00519 1130 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ADH1AP07327 375 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 CA3P07451 260 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 RPL17P18621 184 aaKnown RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 CYP2F1P24903 491 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 SLC1A1P43005 524 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 RPL34P49207 117 aaKnown RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 NDUFV1P49821 464 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 TKTL1P51854 596 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ROR1Q01973 937 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ADCY1Q08828 1119 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ADIGQ0VDE8 80 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 RAB33AQ14088 237 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 SMC1AQ14683 1233 aaKnown RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 MESDQ14696 234 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 CCDC142Q17RM4 750 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 RNF19BQ6ZMZ0 732 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 PEX26Q7Z412 305 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 SLC35F6Q8N357 371 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ATAD1Q8NBU5 361 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ZNF461Q8TAF7 563 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 POF1BQ8WVV4 589 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 MCRS1Q96EZ8 462 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 CEP295NLQ96MC4 621 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 SEPT5Q99719 369 aaPredicted RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 NAPGQ99747 312 aaPredicted RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 NCAPGQ9BPX3 1015 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 TCF25Q9BQ70 676 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 CLSTN3Q9BQT9 956 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 C17orf80Q9BSJ5 609 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 VN1R3Q9BXE9 311 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
TMEM55B-205ENST00000554028 ZBP1Q9H171 429 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 FBXO44Q9H4M3 255 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 SLC28A3Q9HAS3 691 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 RXFP1Q9HBX9 757 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 OSGEPQ9NPF4 335 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 CNGB3Q9NQW8 809 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 TLR9Q9NR96 1032 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 HSFX1Q9UBD0 423 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 AMFRQ9UKV5 643 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
TMEM55B-205ENST00000554028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 TMEM191CA6NGB0 347 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 PRRG1O14668 218 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 SPOPO43791 374 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 BUB1BO60566 1050 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 BEST1O76090 585 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 RTN3O95197 1032 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ZBED1O96006 694 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 GLI1P08151 1106 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 HAPLN1P10915 354 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 MYOGP15173 224 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ATF2P15336 505 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 KLRC2P26717 231 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ALDH1A3P47895 512 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 CDR1P51861 262 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 RNASE9P60153 205 aaKnown RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ERVK-21P61565 698 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 MRPS5P82675 430 aaKnown RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 DUSP4Q13115 394 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 GPM6BQ13491 265 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 PIGHQ14442 188 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 VEPH1Q14D04 833 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ACAP1Q15027 740 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 TAF12Q16514 161 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 C11orf63Q6NUN7 778 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 RSPO2Q6UXX9 243 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 FAM183BPQ6ZVS7 135 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 NUP93Q8N1F7 819 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 SPPL3Q8TCT6 385 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 IRGQQ8WZA9 623 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 FAM149B1Q96BN6 582 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 MCEEQ96PE7 176 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 CYP4F11Q9HBI6 524 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ALG13Q9NP73 1137 aaKnown RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 METTL5Q9NRN9 209 aaKnown RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 ASNSD1Q9NWL6 643 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 COMMD8Q9NX08 183 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 CHORDC1Q9UHD1 332 aaPredicted RBP10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 SALL4Q9UJQ4 1053 aa10.99□□□□□ -0.65
TMEM55B-205ENST00000554028 MTUS1Q9ULD2 1270 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms