RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PRPF4BQ13523 1007 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 NOLC1Q14978 699 aaKnown RBP eCLIP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 Q4G0T1 1027 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 PLA2G4FQ68DD2 849 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 DHRS13Q6UX07 377 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 MON1AQ86VX9 555 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 TREML1Q86YW5 311 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 NOSTRINQ8IVI9 506 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ZBTB8OSQ8IWT0 167 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ALLCQ8N6M5 410 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 IL17RCQ8NAC3 791 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 BAHD1Q8TBE0 780 aaPredicted RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 SNRNP27Q8WVK2 155 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 RUFY2Q8WXA3 655 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ZNF516Q92618 1163 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 NUP205Q92621 2012 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 MRPS31Q92665 395 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 USP13Q92995 863 aaPredicted RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 SUSD3Q96L08 255 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 HSPA12BQ96MM6 686 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ZNF578Q96N58 590 aaPredicted RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 PPP1R10Q96QC0 940 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 HS3ST6Q96QI5 342 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 PNKPQ96T60 521 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 SEMA4CQ9C0C4 833 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ZMYND12Q9H0C1 365 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 SMG9Q9H0W8 520 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 C2orf40Q9H1Z8 148 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 FZD8Q9H461 694 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 TTC12Q9H892 705 aaPredicted RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 LRRC4CQ9HCJ2 640 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 DMGDHQ9UI17 866 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 PLXNB3Q9ULL4 1909 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 GDAQ9Y2T3 454 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 FREM2Q5SZK8 3169 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ATG2BQ96BY7 2078 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 MYH9P35579 1960 aaKnown RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 K7ELQ4 463 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 SGK1O00141 431 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 TERTO14746 1132 aaKnown RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 BCAT2O15382 392 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 B4GALT5O43286 388 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 PRC1O43663 620 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CYP21A2P08686 494 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 USP17L7P0C7H9 530 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 PAX3P23760 479 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 IGFBP6P24592 240 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 MCM4P33991 863 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 ARL2P36404 184 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 GRIA2P42262 883 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 HNRNPUQ00839 825 aaKnown RBP eCLIP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 FAM160A1Q05DH4 1040 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 SMARCB1Q12824 385 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 MYBPC2Q14324 1141 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 MTF1Q14872 753 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 EPHA7Q15375 998 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 TBC1D25Q3MII6 688 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 DCAF4L1Q3SXM0 396 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 SGO2Q562F6 1265 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 PPP1R26Q5T8A7 1209 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 MEI1Q5TIA1 1274 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 EMC10Q5UCC4 262 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 SGMS1Q86VZ5 419 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 SLC41A1Q8IVJ1 513 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC116Q8IYX3 515 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CADM4Q8NFZ8 388 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 DNASE2BQ8WZ79 361 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 TTC9Q92623 222 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 EZH1Q92800 747 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 MARVELD3Q96A59 401 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC74AQ96AQ1 378 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 LENG9Q96B70 501 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 FAM20AQ96MK3 541 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC43Q96MW1 224 aaKnown RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 PGLYRP2Q96PD5 576 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 LPIN3Q9BQK8 851 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 POLR3CQ9BUI4 534 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC94Q9BW85 323 aaPredicted RBP5.6□□□□□ -1.51
CKAP4-203ENST00000553039 FTSJ1Q9UET6 329 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 DOPEY2Q9Y3R5 2298 aa5.6□□□□□ -1.51
CKAP4-203ENST00000553039 CYP3A7-CYP3A51PA0A087WV96 503 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 IGHV1OR15-9A0A0B4J2B8 117 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC196A0A1B0GTZ2 297 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 TBC1D3BA6NDS4 549 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 LRRIQ4A6NIV6 560 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 MEI4A8MW99 385 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 ACKR2O00590 384 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 SLC9A3R1O14745 358 aaPredicted RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 SUV39H1O43463 412 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PCDHGA12O60330 932 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 TNFRSF21O75509 655 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 KAT7O95251 611 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 NFICP08651 508 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 XRCC6P12956 609 aaKnown RBP eCLIP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 MYF5P13349 255 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 RXRAP19793 462 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 CYP3A7P24462 503 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms