RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ATF2P15336 505 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 IBSPP21815 317 aaPredicted RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 ACAT1P24752 427 aaKnown RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 VPS41P49754 854 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 ATP11AP98196 1134 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 FAM26DQ5JW98 314 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 CCDC89Q8N998 374 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 FAM76AQ8TAV0 307 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 PXYLP1Q8TE99 480 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 ZNF148Q9UQR1 794 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 A0A0U1RQF3 1178 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 LCP1P13796 627 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 PTPN1P18031 435 aaKnown RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 SDC4P31431 198 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 RPL34P49207 117 aaKnown RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 DYNLT1P63172 113 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 ZNF844Q08AG5 666 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 CCDC142Q17RM4 750 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 CYP4V2Q6ZWL3 525 aaPredicted RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 CLEC4CQ8WTT0 213 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 GLT1D1Q96MS3 346 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 HNRNPABQ99729 332 aaKnown RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 ADAM2Q99965 735 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 PABPC3Q9H361 631 aaKnown RBP20.06■□□□□ 0.8
BRF1-215ENST00000549655 CYLDQ9NQC7 956 aa20.06■□□□□ 0.8
BRF1-215ENST00000549655 CASTOR2A6NHX0 329 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 PRPSAP2O60256 369 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 CST8O60676 142 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 ACADSBP45954 432 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 ITGA8P53708 1063 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 BBS12Q6ZW61 710 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 FUKQ8N0W3 1084 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 C3orf58Q8NDZ4 430 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 HSFY1Q96LI6 401 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 EPB41L4BQ9H329 900 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 RSAD1Q9HA92 442 aa20.05■□□□□ 0.8
BRF1-215ENST00000549655 DRG1Q9Y295 367 aaKnown RBP20.05■□□□□ 0.8
BRF1-215ENST00000549655 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.05■□□□□ 0.8
BRF1-215ENST00000549655 GOLGA6L10A6NI86 522 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 KLRC2P26717 231 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 RPL9P32969 192 aaKnown RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 VCPP55072 806 aaKnown RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 SLMAPQ14BN4 828 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 KCTD16Q68DU8 428 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 RHBDF2Q6PJF5 856 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 PRUNE1Q86TP1 453 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 FAM172AQ8WUF8 416 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 NKD2Q969F2 451 aaPredicted RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 CALN1Q9BXU9 219 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 DUSP16Q9BY84 665 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 NGRNQ9NPE2 291 aaKnown RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.04■□□□□ 0.8
BRF1-215ENST00000549655 DDX43Q9NXZ2 648 aaKnown RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 PSD3Q9NYI0 1048 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 MOXD2PA6NHM9 499 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 CLDN5O00501 218 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 XPO1O14980 1071 aaKnown RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 PLCB3Q01970 1234 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 OASLQ15646 514 aaKnown RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 UPP1Q16831 310 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 KIAA0319Q5VV43 1072 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 DSTYKQ6XUX3 929 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 SLC26A9Q7LBE3 791 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 ALLCQ8N6M5 410 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 PAAF1Q9BRP4 392 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 SEMA4AQ9H3S1 761 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 TMBIM4Q9HC24 238 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 SAE1Q9UBE0 346 aaPredicted RBP20.04■□□□□ 0.8
BRF1-215ENST00000549655 ANAPC5Q9UJX4 755 aa20.04■□□□□ 0.8
BRF1-215ENST00000549655 GNRH1P01148 92 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 POMCP01189 267 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 INHAP05111 366 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 MYZAPP0CAP1 466 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 RARGP13631 454 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 DESP17661 470 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 SCNN1AP37088 669 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 LMAN1P49257 510 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 CDH6P55285 790 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 SLC8A3P57103 927 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 CAV1Q03135 178 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 MDH1BQ5I0G3 518 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 SCYL2Q6P3W7 929 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 CCDC25Q86WR0 208 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 RFX6Q8HWS3 928 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 TMEM86AQ8N2M4 240 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 SH2D3CQ8N5H7 860 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 TTC13Q8NBP0 860 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 SLC35B2Q8TB61 432 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 ACTL9Q8TC94 416 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 PGBD4Q96DM1 585 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 TRPV6Q9H1D0 765 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 TIMM13Q9Y5L4 95 aaPredicted RBP20.03■□□□□ 0.8
BRF1-215ENST00000549655 ITGAVP06756 1048 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 LHX1P48742 406 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 CDR1P51861 262 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 OTUD4Q01804 1114 aaKnown RBP20.03■□□□□ 0.8
BRF1-215ENST00000549655 DENND2CQ68D51 928 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 LHX8Q68G74 356 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 PAQR9Q6ZVX9 377 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms