RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SLC38A7Q9NVC3 462 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 RUVBL2Q9Y230 463 aaKnown RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SF3B1O75533 1304 aaKnown RBP eCLIP10.75□□□□□ -0.695e-6■■■■■ 139.6
PCDH9-204ENST00000544246 PSMD14O00487 310 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 P4HA2O15460 535 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SERPINB8P50452 374 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 GEMP55040 296 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 GRIK3Q13003 919 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 EPHA7Q15375 998 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 HMG20AQ9NP66 347 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 KLHL28Q9NXS3 571 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 POLR1DQ9Y2S0 133 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 NCF1BA6NI72 391 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 NCF1CA8MVU1 366 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 H3BMM5 538 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SKAP2O75563 359 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 EYA4O95677 639 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 NCF1P14598 390 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 GOLGA7BQ2TAP0 167 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 CYP4A22Q5TCH4 519 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 PLA2G4FQ68DD2 849 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 PI16Q6UXB8 463 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 RBBP8NLQ8NC74 664 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 TFB1MQ8WVM0 346 aaKnown RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 MCRS1Q96EZ8 462 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 KATNAL1Q9BW62 490 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 COMMD8Q9NX08 183 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 PCDHA10Q9Y5I2 948 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 KBTBD13C9JR72 458 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 TPP2P29144 1249 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 C3orf20Q8ND61 904 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SPATA18Q8TC71 538 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SHCBP1LQ9BZQ2 653 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 CEP44Q9C0F1 390 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 NOL6Q9H6R4 1146 aaKnown RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 COQ6Q9Y2Z9 468 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 BCORL1Q5H9F3 1711 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 USP27XA6NNY8 438 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 KIF28PB7ZC32 967 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 TEX33O43247 280 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 SUPT7LO94864 414 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 IL18RAPO95256 599 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 WARSP23381 471 aaKnown RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 CCT3P49368 545 aaKnown RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 ATP1A4Q13733 1029 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 DENND1BQ6P3S1 775 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 APOBEC3FQ8IUX4 373 aaKnown RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 TRPM5Q9NZQ8 1165 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 IQGAP3Q86VI3 1631 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 PTCH1Q13635 1447 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 FOSL2P15408 326 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 ITGA9Q13797 1035 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 TAF13Q15543 124 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 NDUFAF6Q330K2 333 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 IRAK1BP1Q5VVH5 260 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 MRNIPQ6NTE8 343 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 ATP6V0D2Q8N8Y2 350 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 UTYO14607 1347 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 NR5A2O00482 541 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 PDGFRBP09619 1106 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 LSP1P33241 339 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 ALDH1A3P47895 512 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 HNMTP50135 292 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 EFHC1Q5JVL4 640 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 C10orf120Q5SQS8 335 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 JAMLQ86YT9 394 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 SCUBE1Q8IWY4 988 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 OR2W6PQ8NHA6 318 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 MASTLQ96GX5 879 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 TMEM106CQ9BVX2 250 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 KCTD10Q9H3F6 313 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 BCL10O95999 233 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 RXRGP48443 463 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 CDH18Q13634 790 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 CCDC157Q569K6 752 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 MTSS1LQ765P7 747 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 BTN2A1Q7KYR7 527 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 ADGRF4Q8IZF3 695 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 SGF29Q96ES7 293 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 PPP1R10Q96QC0 940 aaKnown RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 JPH1Q9HDC5 661 aaPredicted RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 SCUBE2Q9NQ36 999 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 GNG14A0A1W2PPG7 69 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 ITGA4P13612 1032 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 LBPP18428 481 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 PBLDP30039 288 aaPredicted RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 PPP2R1BP30154 601 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 USP11P51784 963 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 NME5P56597 212 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 VAC14Q08AM6 782 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 NCOA4Q13772 614 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 SLC18A3Q16572 532 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 TAF8Q7Z7C8 310 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 FAM228AQ86W67 206 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 B3GALNT2Q8NCR0 500 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 OXER1Q8TDS5 423 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms