RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 KCNH2Q12809 1159 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 SNX30Q5VWJ9 437 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 CLEC20AQ6ZU45 233 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 TPRG1Q6ZUI0 275 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 ARL14EPQ8N8R7 260 aaPredicted RBP16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 SCAMP5Q8TAC9 235 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 OVCA2Q8WZ82 227 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 TMEM176AQ96HP8 235 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 FAM83CQ9BQN1 747 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 DNAI2Q9GZS0 605 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 MTF2Q9Y483 593 aaPredicted RBP16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 HHLA1C9JL84 531 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 ZDHHC11BP0C7U3 371 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 TCF3P15923 654 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 HDCP19113 662 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 CD72P21854 359 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 RFX1P22670 979 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 ADORA2BP29275 332 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 MAP3K7CLP57077 242 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 ZNF394Q53GI3 561 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 PPP1R26Q5T8A7 1209 aaPredicted RBP16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 ZNF852Q6ZMS4 543 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 DTWD2Q8NBA8 298 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 ZFYVE19Q96K21 471 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 SLITRK1Q96PX8 696 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 NELL2Q99435 816 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 TRPC7Q9HCX4 862 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 PNPLA8Q9NP80 782 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 LTB4R2Q9NPC1 389 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 THG1LQ9NWX6 298 aaKnown RBP16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 ARHGAP26Q9UNA1 814 aa16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.36■□□□□ 0.21
ECHDC2-223ENST00000542552 USP34Q70CQ2 3546 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 MAN2B1O00754 1011 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 OAS1P00973 400 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 AFPP02771 609 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 CKMP06732 381 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 DCNP07585 359 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 TBXAS1P24557 533 aaPredicted RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 ERCC5P28715 1186 aaPredicted RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 PLA2G5P39877 138 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 PDE6CP51160 858 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 PTPN5P54829 565 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 SLC7A9P82251 487 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 ZXDBP98169 803 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 CETN1Q12798 172 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 LRMPQ12912 555 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 USP4Q13107 963 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 FZD5Q13467 585 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 ZNF77Q15935 545 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 ARHGAP17Q68EM7 881 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 EHBP1Q8NDI1 1231 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 PDZD8Q8NEN9 1154 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 CSGALNACT1Q8TDX6 532 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 FBXO32Q969P5 355 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 CLDN23Q96B33 292 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 HEXIM2Q96MH2 286 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 DUSP16Q9BY84 665 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 GKN1Q9NS71 199 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 PIAS3Q9Y6X2 628 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 WDR87Q6ZQQ6 2873 aa16.35■□□□□ 0.21
ECHDC2-223ENST00000542552 FAM170BA6NMN3 283 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 TARSP26639 723 aaKnown RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 YWHAEP62258 255 aaKnown RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 NHLH1Q02575 133 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 TNK2Q07912 1038 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 GPRIN1Q7Z2K8 1008 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 MSANTD3Q96H12 275 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 NT5C1BQ96P26 610 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 UBXN6Q9BZV1 441 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 FBXO44Q9H4M3 255 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 C8orf33Q9H7E9 229 aaPredicted RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 CHORDC1Q9UHD1 332 aaPredicted RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 MRPS17Q9Y2R5 130 aaKnown RBP16.34■□□□□ 0.21
ECHDC2-223ENST00000542552 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 PGFP49763 221 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 TUBP50607 506 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 GCNT1Q02742 428 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 IFRD2Q12894 506 aaPredicted RBP16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 ITPRIPL2Q3MIP1 535 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 KIAA1958Q8N8K9 716 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 ANKRD52Q8NB46 1076 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 SH3RF2Q8TEC5 729 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 THAP9Q9H5L6 903 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 HPS4Q9NQG7 708 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 GMIPQ9P107 970 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 KIAA1257Q9ULG3 409 aa16.33■□□□□ 0.2
ECHDC2-223ENST00000542552 SCML2Q9UQR0 700 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms