RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PDGFCQ9NRA1 345 aa6.09□□□□□ -1.43
CPSF7-220ENST00000541963 SAE1Q9UBE0 346 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-220ENST00000541963 DPP7Q9UHL4 492 aa6.09□□□□□ -1.43
CPSF7-220ENST00000541963 ZMYND8Q9ULU4 1186 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-220ENST00000541963 PCDHB6Q9Y5E3 794 aa6.09□□□□□ -1.43
CPSF7-220ENST00000541963 SNX14Q9Y5W7 946 aa6.09□□□□□ -1.43
CPSF7-220ENST00000541963 CYP46A1Q9Y6A2 500 aa6.09□□□□□ -1.43
CPSF7-220ENST00000541963 FRMPD3Q5JV73 1810 aa6.09□□□□□ -1.44
CPSF7-220ENST00000541963 A0A0A6YYJ9 748 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 KLF18A0A0U1RQI7 1052 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 hCG_1984214I3L0E3 225 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA12O60330 932 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 OPHN1O60890 802 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 GH1P01241 217 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PFKMP08237 780 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 TGFB3P10600 412 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 OSMP13725 252 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 SYN1P17600 705 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 RXRAP19793 462 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 CASTP20810 708 aaKnown RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 RPS6KB1P23443 525 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 IGFBP6P24592 240 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 CCND2P30279 289 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 LIMS1P48059 325 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 MTNR1BP49286 362 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 METAP2P50579 478 aaKnown RBP eCLIP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 EPHB3P54753 998 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 IL13RA1P78552 427 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 CDK17Q00537 523 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 CD83Q01151 205 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 SMAD4Q13485 552 aaKnown RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 STILQ15468 1287 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 MAN2A1Q16706 1144 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 MUM1Q2TAK8 710 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 GFOD2Q3B7J2 385 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 TRIM60Q495X7 471 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PHF19Q5T6S3 580 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 NXNQ6DKJ4 435 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 GRAMD4Q6IC98 578 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 CCSAPQ6IQ19 270 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 XRRA1Q6P2D8 792 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 TRMT10BQ6PF06 316 aaKnown RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 CPLX2Q6PUV4 134 aaKnown RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 APOA5Q6Q788 366 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 UNQ6494/PRO21346Q6UXR6 183 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 SEPT14Q6ZU15 432 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 TMTC3Q6ZXV5 915 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 RUFY3Q7L099 469 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 BMP8AQ7Z5Y6 402 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 TCEAL8Q8IYN2 117 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 FBXL16Q8N461 479 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 ZNF713Q8N859 430 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 ACE2Q9BYF1 805 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 TM6SF1Q9BZW5 370 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PSTPIP2Q9H939 334 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PRSS50Q9UI38 385 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 WASF3Q9UPY6 502 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA9Q9Y5G4 932 aaKnown RBP6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA8Q9Y5G5 932 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA7Q9Y5G6 932 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA6Q9Y5G7 932 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA3Q9Y5H0 932 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHGA2Q9Y5H1 932 aa6.08□□□□□ -1.44
CPSF7-220ENST00000541963 MCM3APO60318 1980 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 ASTN1O14525 1302 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PQBP1O60828 265 aaKnown RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PLEKHA8P1O95397 391 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 IL18BPO95998 194 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 MYL3P08590 195 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 CLTBP09497 229 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 SUPT20HL2P0C7V6 817 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 HOXA13P31271 388 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 BEX3Q00994 111 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 TLE2Q04725 743 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 ADAM9Q13443 819 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 ITGA7Q13683 1181 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 GTF2H3Q13889 308 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 ODF1Q14990 250 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PGM5Q15124 567 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 ANO4Q32M45 955 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 MINDY4Q4G0A6 757 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 MCTP2Q6DN12 878 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 CXCL17Q6UXB2 119 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 SYDE1Q6ZW31 735 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 ANKRD33Q7Z3H0 272 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 KCNK18Q7Z418 384 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 HEATR3Q7Z4Q2 680 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 RAB11FIP4Q86YS3 637 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 GLB1L2Q8IW92 636 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 CMTR2Q8IYT2 770 aaKnown RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PPM1NQ8N819 430 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 CCDC12Q8WUD4 166 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 DYDC2Q96IM9 177 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 CDHR1Q96JP9 859 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 TCEANC2Q96MN5 208 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 SLC38A3Q99624 504 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms