RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 GUCY2FP51841 1108 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
SSPN-207ENST00000540266 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
SSPN-207ENST00000540266 LY6DQ14210 128 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 KRT32Q14532 448 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 SEZ6Q53EL9 994 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 STKLD1Q8NE28 680 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 TTC16Q8NEE8 873 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 TTC9Q92623 222 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 KIFAP3Q92845 792 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 TCHPQ9BT92 498 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 TUFT1Q9NNX1 390 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 CD93Q9NPY3 652 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.62
SSPN-207ENST00000540266 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.15□□□□□ -0.62
SSPN-207ENST00000540266 NOTCH2Q04721 2471 aa11.15□□□□□ -0.62
SSPN-207ENST00000540266 ANKRD17O75179 2603 aaKnown RBP11.15□□□□□ -0.62
SSPN-207ENST00000540266 HELZP42694 1942 aaKnown RBP11.15□□□□□ -0.62
SSPN-207ENST00000540266 MYO16Q9Y6X6 1858 aa11.15□□□□□ -0.63
SSPN-207ENST00000540266 ADRB2P07550 413 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 HDCP19113 662 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 SAFBQ15424 915 aaKnown RBP eCLIP11.14□□□□□ -0.63
SSPN-207ENST00000540266 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
SSPN-207ENST00000540266 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 SDHAF4Q5VUM1 108 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 MIB1Q86YT6 1006 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
SSPN-207ENST00000540266 KCNB2Q92953 911 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 TMEM176AQ96HP8 235 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 TRPC7Q9HCX4 862 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 ARHGEF4Q9NR80 690 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 TMLHEQ9NVH6 421 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 ABI2Q9NYB9 513 aaPredicted RBP11.14□□□□□ -0.63
SSPN-207ENST00000540266 GMIPQ9P107 970 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 UXTQ9UBK9 157 aaPredicted RBP11.14□□□□□ -0.63
SSPN-207ENST00000540266 UBQLN1Q9UMX0 589 aaKnown RBP11.14□□□□□ -0.63
SSPN-207ENST00000540266 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 AK5Q9Y6K8 562 aa11.14□□□□□ -0.63
SSPN-207ENST00000540266 COL5A1P20908 1838 aaPredicted RBP11.14□□□□□ -0.63
SSPN-207ENST00000540266 PHLPP2Q6ZVD8 1323 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 FLNCQ14315 2725 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 PIRO00625 290 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 PCDHGA12O60330 932 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 TOM1L1O75674 476 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 NFICP08651 508 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 CXCL8P10145 99 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 JUPP14923 745 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 TXKP42681 527 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 RESTQ13127 1097 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 CALCRLQ16602 461 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 TRMT11Q7Z4G4 463 aaKnown RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 FILIP1Q7Z7B0 1213 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 ERICH1Q86X53 443 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 ZCCHC9Q8N567 271 aaKnown RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 ZNF513Q8N8E2 541 aaPredicted RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 CADM4Q8NFZ8 388 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 MED8Q96G25 268 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 MRGPRX1Q96LB2 322 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 HAPLN2Q9GZV7 340 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
SSPN-207ENST00000540266 DSEQ9UL01 958 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 PCDHB5Q9Y5E4 795 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 PCDHGA1Q9Y5H4 931 aa11.13□□□□□ -0.63
SSPN-207ENST00000540266 RELNP78509 3460 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 ANO9A1A5B4 782 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 ARHGEF35A5YM69 484 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 LACTBL1A8MY62 500 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 LEFTY2O00292 366 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 NDUFS2O75306 463 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 CLTAP09496 248 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 HOXB2P14652 356 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 RPA1P27694 616 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 CD6P30203 668 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 NTSR1P30989 418 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 GRK6P43250 576 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 CLDN6P56747 220 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 ATP2C1P98194 919 aaPredicted RBP11.12□□□□□ -0.63
SSPN-207ENST00000540266 MCL1Q07820 350 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 TARDBPQ13148 414 aaKnown RBP eCLIP11.12□□□□□ -0.63
SSPN-207ENST00000540266 DDR2Q16832 855 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 C9orf57Q5W0N0 161 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 METTL3Q86U44 580 aaKnown RBP11.12□□□□□ -0.63
SSPN-207ENST00000540266 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 DAW1Q8N136 415 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
SSPN-207ENST00000540266 TNFRSF25Q93038 417 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 TSPAN18Q96SJ8 248 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 WSB2Q9NYS7 404 aaPredicted RBP11.12□□□□□ -0.63
SSPN-207ENST00000540266 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
SSPN-207ENST00000540266 MUC22E2RYF6 1773 aaPredicted RBP11.12□□□□□ -0.63
SSPN-207ENST00000540266 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
SSPN-207ENST00000540266 SPTAN1Q13813 2472 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms