RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZC3H10Q96K80 434 aaKnown RBP13.33□□□□□ -0.28
VAMP1-206ENST00000538970 ZNF518BQ9C0D4 1074 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 ARRDC1-AS1Q9H2J1 176 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 FAM13BQ9NYF5 915 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 KIAA1549LQ6ZVL6 1849 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 ANAPC1Q9H1A4 1944 aa13.33□□□□□ -0.28
VAMP1-206ENST00000538970 ZNF638Q14966 1978 aaKnown RBP13.32□□□□□ -0.28
VAMP1-206ENST00000538970 A8MXQ7 604 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 EXOC3O60645 756 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 APBB3O95704 486 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 OAS1P00973 400 aaKnown RBP13.32□□□□□ -0.28
VAMP1-206ENST00000538970 CYP17A1P05093 508 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 ATICP31939 592 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 OPRD1P41143 372 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 AFMP43652 599 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 ME1P48163 572 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 CASP4P49662 377 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 TAF10Q12962 218 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 NR1H3Q13133 447 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 DMC1Q14565 340 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 SF3A2Q15428 464 aaKnown RBP13.32□□□□□ -0.28
VAMP1-206ENST00000538970 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
VAMP1-206ENST00000538970 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 KIAA1958Q8N8K9 716 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-206ENST00000538970 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 RNF38Q9H0F5 515 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 SMYD3Q9H7B4 428 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 VRTNQ9H8Y1 702 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 NXF1Q9UBU9 619 aaKnown RBP13.32□□□□□ -0.28
VAMP1-206ENST00000538970 CPQQ9Y646 472 aa13.32□□□□□ -0.28
VAMP1-206ENST00000538970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-206ENST00000538970 LRRIQ3A6PVS8 624 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-206ENST00000538970 CLDN5O00501 218 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 PDIA4P13667 645 aaKnown RBP13.31□□□□□ -0.28
VAMP1-206ENST00000538970 PSMD2Q13200 908 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 CCDC6Q16204 474 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 PLK5Q496M5 336 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 AASDHQ4L235 1098 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-206ENST00000538970 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 TDRD10Q5VZ19 366 aaKnown RBP13.31□□□□□ -0.28
VAMP1-206ENST00000538970 FILIP1Q7Z7B0 1213 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 CCDC26Q8TAB7 109 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 GOLGA5Q8TBA6 731 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 COL26A1Q96A83 441 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 DUSP15Q9H1R2 295 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-206ENST00000538970 SMPD4Q9NXE4 827 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 EBF1Q9UH73 591 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 PCDHGA5Q9Y5G8 931 aa13.31□□□□□ -0.28
VAMP1-206ENST00000538970 MYO16Q9Y6X6 1858 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 C1QTNF9BB2RNN3 333 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 K7EQS6 105 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 KLRC4O43908 158 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 PHACTR2O75167 634 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 ABL1P00519 1130 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 PROS1P07225 676 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 C1QTNF9P0C862 333 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 MPLP40238 635 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 LIMK1P53667 647 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 AP3M2P53677 418 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 CLDN10P78369 228 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 SHC2P98077 582 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 IFRD2Q12894 506 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-206ENST00000538970 BIRC3Q13489 604 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 PKP1Q13835 747 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 ATL3Q6DD88 541 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 FAM35AQ86V20 835 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 C12orf50Q8NA57 414 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-206ENST00000538970 KIAA0895Q8NCT3 520 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 TSTD1Q8NFU3 115 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 PARD3BQ8TEW8 1205 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 USP33Q8TEY7 942 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 RXFP3Q9NSD7 469 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 CFAP97Q9P2B7 532 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
VAMP1-206ENST00000538970 WDFY3Q8IZQ1 3526 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 ANTXRLA6NF34 631 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SLC9A3R1O14745 358 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 DCLK1O15075 740 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 ACTN4O43707 911 aaKnown RBP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 VNN1O95497 513 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 MBL2P11226 248 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 YWHAQP27348 245 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 CDH8P55286 799 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SEC13P55735 322 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms