RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CYP3A7-CYP3A51PA0A087WV96 503 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 A0A1B0GTQ1 180 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 A0A1W2PNU3 283 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-217ENST00000537162 TBC1D3BA6NDS4 549 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 WASH3PC4AMC7 463 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 LEFTY2O00292 366 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 DGAT1O75907 488 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 MT-CO3P00414 261 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 CYP3A7P24462 503 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 EIF2DP41214 584 aaKnown RBP10.27□□□□□ -0.77
CPSF7-217ENST00000537162 GRM5P41594 1212 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 CTSKP43235 329 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 AARSP49588 968 aaKnown RBP eCLIP10.27□□□□□ -0.77
CPSF7-217ENST00000537162 SKOR1P84550 965 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 SRSF6Q13247 344 aaKnown RBP10.27□□□□□ -0.77
CPSF7-217ENST00000537162 ZSCAN23Q3MJ62 389 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 C10orf76Q5T2E6 689 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 ATF7IP2Q5U623 682 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 APOA5Q6Q788 366 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 USP37Q86T82 979 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 SNX19Q92543 992 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 TMEM87BQ96K49 555 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 MTMR9Q96QG7 549 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 SEMA3CQ99985 751 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 KIFC3Q9BVG8 833 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 OXCT2Q9BYC2 517 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-217ENST00000537162 TM9SF3Q9HD45 589 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 CNTN3Q9P232 1028 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 PLAAQ9Y263 795 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 F8P00451 2351 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 STK36Q9NRP7 1315 aa10.27□□□□□ -0.77
CPSF7-217ENST00000537162 A1L4Q6 167 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 PPEF2O14830 753 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 USO1O60763 962 aaKnown RBP10.26□□□□□ -0.77
CPSF7-217ENST00000537162 SLITRK3O94933 977 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ADH5P11766 374 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 TCF3P15923 654 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 YARSP54577 528 aaKnown RBP10.26□□□□□ -0.77
CPSF7-217ENST00000537162 SPAG1Q07617 926 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ST3GAL1Q11201 340 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 CLN3Q13286 438 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 EPHA7Q15375 998 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 RTN1Q16799 776 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 INAVAQ3KP66 663 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ARMCX5Q6P1M9 558 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 PADI6Q6TGC4 694 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 TRMT11Q7Z4G4 463 aaKnown RBP10.26□□□□□ -0.77
CPSF7-217ENST00000537162 TPH2Q8IWU9 490 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ETFBKMTQ8IXQ9 262 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 POM121Q96HA1 1249 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 FAM20AQ96MK3 541 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 GABRG3Q99928 467 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ZCWPW1Q9H0M4 648 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 CDT1Q9H211 546 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ITM2CQ9NQX7 267 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
CPSF7-217ENST00000537162 ARHGAP26Q9UNA1 814 aa10.26□□□□□ -0.77
CPSF7-217ENST00000537162 LRRK1Q38SD2 2015 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 PMS2P1A4D2B8 440 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 USP12O75317 370 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 TULP3O75386 442 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 MCM5P33992 734 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 DCTP40126 519 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 AFMP43652 599 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 LSSP48449 732 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 RARRES1P49788 294 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 TPMTP51580 245 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 GUCY2FP51841 1108 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 FOSBP53539 338 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 CLCA4Q14CN2 919 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 NCAPH2Q6IBW4 605 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 DSTYKQ6XUX3 929 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 CHPFQ8IZ52 775 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 SAP25Q8TEE9 199 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 CCDC94Q9BW85 323 aaPredicted RBP10.25□□□□□ -0.77
CPSF7-217ENST00000537162 MKRN2Q9H000 416 aaKnown RBP10.25□□□□□ -0.77
CPSF7-217ENST00000537162 C6orf106Q9H6K1 298 aaPredicted RBP10.25□□□□□ -0.77
CPSF7-217ENST00000537162 POLR1BQ9H9Y6 1135 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 POLD4Q9HCU8 107 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 TOPORSQ9NS56 1045 aaPredicted RBP10.25□□□□□ -0.77
CPSF7-217ENST00000537162 TMLHEQ9NVH6 421 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 ABI2Q9NYB9 513 aaPredicted RBP10.25□□□□□ -0.77
CPSF7-217ENST00000537162 NUMA1Q14980 2115 aa10.25□□□□□ -0.77
CPSF7-217ENST00000537162 COL27A1Q8IZC6 1860 aaPredicted RBP10.25□□□□□ -0.77
CPSF7-217ENST00000537162 HIP1O00291 1037 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 ZBTB24O43167 697 aaPredicted RBP10.24□□□□□ -0.77
CPSF7-217ENST00000537162 PPFIA2O75334 1257 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 HDCP19113 662 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 GNA11P29992 359 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 GRIK1P39086 918 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 GRIA4P48058 902 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 NCAPHQ15003 741 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms