RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FAM207AQ9NSI2 230 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-214ENST00000533209 COMMD8Q9NX08 183 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 IGSF9Q9P2J2 1179 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 MUTYHQ9UIF7 546 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSBP3-214ENST00000533209 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
SSBP3-214ENST00000533209 GOLGA6L19H0YKK7 550 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 TNFRSF10AO00220 468 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 CYP26A1O43174 497 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 YWHAQP27348 245 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 CLCN1P35523 988 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 KIF11P52732 1056 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 POLR2FP61218 127 aaKnown RBP12.66□□□□□ -0.38
SSBP3-214ENST00000533209 FANCCQ00597 558 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 BST2Q10589 180 aaKnown RBP12.66□□□□□ -0.38
SSBP3-214ENST00000533209 STILQ15468 1287 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 TXNDC8Q6A555 127 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 TANGO2Q6ICL3 276 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 MTSS1LQ765P7 747 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 PIGZQ86VD9 579 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 MON1AQ86VX9 555 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 MAB21L3Q8N8X9 362 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 UBA3Q8TBC4 463 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 ZSCAN18Q8TBC5 510 aaPredicted RBP12.66□□□□□ -0.38
SSBP3-214ENST00000533209 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
SSBP3-214ENST00000533209 SMARCD2Q92925 531 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 FBXO32Q969P5 355 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 RPP25Q9BUL9 199 aaKnown RBP12.66□□□□□ -0.38
SSBP3-214ENST00000533209 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 TRPV4Q9HBA0 871 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 TRPM5Q9NZQ8 1165 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 DAAM1Q9Y4D1 1078 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 NUMBLQ9Y6R0 609 aa12.66□□□□□ -0.38
SSBP3-214ENST00000533209 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 ZNF840PA6NDX5 716 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 F8VZ95 297 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 M0QYV0 167 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 XPO1O14980 1071 aaKnown RBP12.65□□□□□ -0.38
SSBP3-214ENST00000533209 THAP12O43422 761 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SERPINC1P01008 464 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 CFHP08603 1231 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 ZDHHC11BP0C7U3 371 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SETSIPP0DME0 302 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.38
SSBP3-214ENST00000533209 WEE1P30291 646 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 GNA15P30679 374 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 PLA2G4AP47712 749 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 PPP3CCP48454 512 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 PGFP49763 221 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 JAM2P57087 298 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SLC8A3P57103 927 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 NR1I3Q14994 352 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 RAB41Q5JT25 222 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 ARID3BQ8IVW6 561 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-214ENST00000533209 CMTM8Q8IZV2 173 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SLC44A3Q8N4M1 653 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 PDZD8Q8NEN9 1154 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SLC35F5Q8WV83 523 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 OVCA2Q8WZ82 227 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SECISBP2LQ93073 1101 aaKnown RBP12.65□□□□□ -0.38
SSBP3-214ENST00000533209 RSPRY1Q96DX4 576 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 PCMTD1Q96MG8 357 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SLITRK1Q96PX8 696 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 KXD1Q9BQD3 176 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 PLA2G2FQ9BZM2 168 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 FBXO44Q9H4M3 255 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 GMIPQ9P107 970 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 SORCS3Q9UPU3 1222 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 USP3Q9Y6I4 520 aa12.65□□□□□ -0.38
SSBP3-214ENST00000533209 NCANO14594 1321 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 TRIOO75962 3097 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 MED7O43513 233 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 DCXO43602 365 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 ECI2O75521 394 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 PRAMEF12O95522 483 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 VIPR2P41587 438 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 GPD2P43304 727 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 PTK2Q05397 1052 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 TDGQ13569 410 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 MEA1Q16626 185 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 SNX30Q5VWJ9 437 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 DENND1BQ6P3S1 775 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 SLC47A2Q86VL8 602 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 SLC22A12Q96S37 553 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 CYP2S1Q96SQ9 504 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 SMOC2Q9H3U7 446 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms