RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 FAM237AA0A1B0GTK4 181 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 PATE3B3GLJ2 98 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 LEFTY2O00292 366 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 KHNYNO15037 678 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 IDEP14735 1019 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 TCF3P15923 654 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 BDNFP23560 247 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 GRIK1P39086 918 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 MAGEA11P43364 429 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 PDE6CP51160 858 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 USP46P62068 366 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CYP27A1Q02318 531 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 FOXC1Q12948 553 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 MYO1EQ12965 1108 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CRY1Q16526 586 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 GAB4Q2WGN9 574 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 VSTM1Q6UX27 236 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 UNQ6494/PRO21346Q6UXR6 183 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 DENND5BQ6ZUT9 1274 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 SV2BQ7L1I2 683 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 FILIP1Q7Z7B0 1213 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 C11orf74Q86VG3 221 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CEP57L1Q8IYX8 460 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 GPD1LQ8N335 351 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CCDC33Q8N5R6 958 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 MDGA1Q8NFP4 955 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 KBTBD7Q8WVZ9 684 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 HPDLQ96IR7 371 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 ANKRD36BP1Q96IX9 119 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 SPATA17Q96L03 361 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CNOT6LQ96LI5 555 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 FGFBP2Q9BYJ0 223 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CRTAC1Q9NQ79 661 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 CDH9Q9ULB4 789 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 MMP17Q9ULZ9 603 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 R3HCC1Q9Y3T6 440 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 PCDH15Q96QU1 1955 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 PTPRJQ12913 1337 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 DMXL2Q8TDJ6 3036 aa10.22□□□□□ -0.77
TRAPPC4-206ENST00000525303 ATRXP46100 2492 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 CDX4O14627 284 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 SCAMP3O14828 347 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 POLR2DO15514 142 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PRPF6O94906 941 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 TNNC2P02585 160 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 CYP17A1P05093 508 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 MYL1P05976 194 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PDGFRBP09619 1106 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PFKFB1P16118 471 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PFKLP17858 780 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 SPINK2P20155 84 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PTMSP20962 102 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 ANXA13P27216 316 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 SYKP43405 635 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 DHPSP49366 369 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 UBE2HP62256 183 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 ALCAMQ13740 583 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 MAPRE1Q15691 268 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 UAP1L1Q3KQV9 507 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 DPH6Q7L8W6 267 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 LIMS2Q7Z4I7 341 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 SFTPA1Q8IWL2 248 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PDILTQ8N807 584 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 OR5B17Q8NGF7 314 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PCED1BQ96HM7 432 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 RNF38Q9H0F5 515 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 TNMDQ9H2S6 317 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PANK4Q9NVE7 773 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 INTS13Q9NVM9 706 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 SMPD4Q9NXE4 827 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 TRPM5Q9NZQ8 1165 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 HOOK1Q9UJC3 728 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 ZMIZ1Q9ULJ6 1067 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 HPSEQ9Y251 543 aa10.21□□□□□ -0.77
TRAPPC4-206ENST00000525303 PKD1L2Q7Z442 2459 aa10.21□□□□□ -0.78
TRAPPC4-206ENST00000525303 DSPP15924 2871 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 A0A1B0GVL5 298 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 FRMD3A2A2Y4 597 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 ZNF840PA6NDX5 716 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 TRIM66O15016 1216 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 TOP3BO95985 862 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 ABL1P00519 1130 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 CEACAM1P13688 526 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 HNRNPLP14866 589 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 CSRP1P21291 193 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 PTPRBP23467 1997 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 TIE1P35590 1138 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 SLC6A11P48066 632 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 IRX4P78413 519 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 SLC7A9P82251 487 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 MRPS21P82921 87 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 MESP2Q0VG99 397 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 TP53BP1Q12888 1972 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 DHCR24Q15392 516 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 E2F4Q16254 413 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 DUOXA2Q1HG44 320 aa10.2□□□□□ -0.78
TRAPPC4-206ENST00000525303 MDH1BQ5I0G3 518 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms