RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LPIN1Q14693 890 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 WSCD1Q658N2 575 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 HSPH1Q92598 858 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 CFAP57Q96MR6 1250 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 PEBP4Q96S96 227 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 B3GNT5Q9BYG0 378 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 TMBIM4Q9HC24 238 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 TRMT13Q9NUP7 481 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 ZNF148Q9UQR1 794 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 DRG1Q9Y295 367 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 GABRDO14764 452 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 MGEA5O60502 916 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 CAPN15O75808 1086 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 SDC4P31431 198 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 ACADSBP45954 432 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 SCNN1GP51170 649 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 VCPP55072 806 aaKnown RBP19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 DSC3Q14574 896 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 TRIM71Q2Q1W2 868 aaKnown RBP19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 RHBDF2Q6PJF5 856 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 BBS12Q6ZW61 710 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 BBOF1Q8ND07 529 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 NKD2Q969F2 451 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 HAUS1Q96CS2 278 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 HSFY1Q96LI6 401 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 HNRNPABQ99729 332 aaKnown RBP19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 EPB41L4BQ9H329 900 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 CACNG4Q9UBN1 327 aa19.36■□□□□ 0.69
TRAPPC9-210ENST00000521667 PRPSAP2O60256 369 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 CD48P09326 243 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 MYZAPP0CAP1 466 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 RARGP13631 454 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 DESP17661 470 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 IGFBP6P24592 240 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 KLRC2P26717 231 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 TKTP29401 623 aaKnown RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 SCNN1AP37088 669 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 LMAN1P49257 510 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 VPS41P49754 854 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 CLCNKBP51801 687 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 ITGA8P53708 1063 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 EIF3BP55884 814 aaKnown RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 CDO1Q16878 200 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 FAM26DQ5JW98 314 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 ZNF771Q7L3S4 317 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 TTC13Q8NBP0 860 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 CCHCR1Q8TD31 782 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 ATP6V1G3Q96LB4 118 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 SENP8Q96LD8 212 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 FRMD8P1Q9BZ68 369 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 CST8O60676 142 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 NUDT17P0C025 328 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 PTPN1P18031 435 aaKnown RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 DYNLT1P63172 113 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 ATP11AP98196 1134 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 OASLQ15646 514 aaKnown RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 RAB6CQ53S08 254 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 KCTD16Q68DU8 428 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 CYP4V2Q6ZWL3 525 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 SLC26A9Q7LBE3 791 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 ALLCQ8N6M5 410 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 PXYLP1Q8TE99 480 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 RAB6CQ9H0N0 254 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 ANAPC5Q9UJX4 755 aa19.35■□□□□ 0.69
TRAPPC9-210ENST00000521667 A0A0U1RQF3 1178 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 HMGB1P1B2RPK0 211 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 XPO1O14980 1071 aaKnown RBP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 ATP2C2O75185 946 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 ITGAVP06756 1048 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 LCP1P13796 627 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 ACAT1P24752 427 aaKnown RBP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 RPL9P32969 192 aaKnown RBP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 DENND2CQ68D51 928 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 FUKQ8N0W3 1084 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 TMEM86AQ8N2M4 240 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 SLC35B2Q8TB61 432 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 FAM172AQ8WUF8 416 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 NCAPGQ9BPX3 1015 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 TSPYL1Q9H0U9 437 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 RSAD1Q9HA92 442 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 ENDOD1O94919 500 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 SLC8A3P57103 927 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 IFFO1Q0D2I5 559 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 ARCQ7LC44 396 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 RFX6Q8HWS3 928 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 SH2D3CQ8N5H7 860 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 RNF169Q8NCN4 708 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 CLEC4CQ8WTT0 213 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 PKNOX2Q96KN3 472 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 GLT1D1Q96MS3 346 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 CALN1Q9BXU9 219 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 DUSP16Q9BY84 665 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 SEMA4AQ9H3S1 761 aa19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 NGRNQ9NPE2 291 aaKnown RBP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 DDX43Q9NXZ2 648 aaKnown RBP19.34■□□□□ 0.69
TRAPPC9-210ENST00000521667 MOXD2PA6NHM9 499 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 INHAP05111 366 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 LHX1P48742 406 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 CDH6P55285 790 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms