RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 VNN1O95497 513 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 FGAP02671 866 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 KRT85P78386 507 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 TMTC4Q5T4D3 741 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 DEPDC1Q5TB30 811 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 DPY19L3Q6ZPD9 716 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 HEATR3Q7Z4Q2 680 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 SFTPA1Q8IWL2 248 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 CXorf36Q9H7Y0 433 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 SPC25Q9HBM1 224 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 TXLNGQ9NUQ3 528 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 TFCP2L1Q9NZI6 479 aa3.54□□□□□ -1.84
PCM1-214ENST00000521338 TRIP12Q14669 1992 aaPredicted RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 GCATO75600 419 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 GAS8-AS1O95177 125 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 MT-CO1P00395 513 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 MT-CO3P00414 261 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 PLA2G2AP14555 144 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ATF7P17544 494 aaPredicted RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 ADORA2AP29274 412 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 PDE6CP51160 858 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ADKP55263 362 aaKnown RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 EXOSC9Q06265 439 aaKnown RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 MYO1EQ12965 1108 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 MTX1Q13505 466 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 PTPROQ16827 1216 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 UAP1L1Q3KQV9 507 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ZIK1Q3SY52 487 aaPredicted RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 EMC10Q5UCC4 262 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 DAB2IPQ5VWQ8 1189 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 CAND1Q86VP6 1230 aaKnown RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 ZNF280BQ86YH2 543 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ANKRD13BQ86YJ7 626 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 RFX6Q8HWS3 928 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ABRAQ8N0Z2 381 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 MMP21Q8N119 569 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 LINC01465Q8N7H1 131 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 RSPRY1Q96DX4 576 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 GPATCH3Q96I76 525 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 ZPBPQ9BS86 351 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 PUS7LQ9H0K6 701 aaKnown RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 TRMT13Q9NUP7 481 aaKnown RBP3.53□□□□□ -1.84
PCM1-214ENST00000521338 AMFRQ9UKV5 643 aa3.53□□□□□ -1.84
PCM1-214ENST00000521338 SLC16A6O15403 523 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 APEHP13798 732 aaKnown RBP3.52□□□□□ -1.85
PCM1-214ENST00000521338 TYRP14679 529 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 HDCP19113 662 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 VIPR2P41587 438 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 ZXDBP98169 803 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 PCBP2Q15366 365 aaKnown RBP eCLIP3.52□□□□□ -1.85
PCM1-214ENST00000521338 UBE2Q1Q7Z7E8 422 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 IZUMO1Q8IYV9 350 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 OSCP1Q8WVF1 389 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 PUS7Q96PZ0 661 aaKnown RBP3.52□□□□□ -1.85
PCM1-214ENST00000521338 DPCDQ9BVM2 203 aaPredicted RBP3.52□□□□□ -1.85
PCM1-214ENST00000521338 MCM8Q9UJA3 840 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 PCDHA1Q9Y5I3 950 aa3.52□□□□□ -1.85
PCM1-214ENST00000521338 XPOTO43592 962 aaKnown RBP3.51□□□□□ -1.85
PCM1-214ENST00000521338 UNC5CO95185 931 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 RPS13P62277 151 aaKnown RBP3.51□□□□□ -1.85
PCM1-214ENST00000521338 LARS2Q15031 903 aaKnown RBP3.51□□□□□ -1.85
PCM1-214ENST00000521338 C4orf46Q504U0 113 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 GSG1LQ6UXU4 331 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 FAM84BQ96KN1 310 aaPredicted RBP3.51□□□□□ -1.85
PCM1-214ENST00000521338 GAR1Q9NY12 217 aaKnown RBP3.51□□□□□ -1.85
PCM1-214ENST00000521338 SLC5A4Q9NY91 659 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 FEZ2Q9UHY8 353 aaPredicted RBP3.51□□□□□ -1.85
PCM1-214ENST00000521338 COL4A3BPQ9Y5P4 624 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 SNX14Q9Y5W7 946 aa3.51□□□□□ -1.85
PCM1-214ENST00000521338 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 PPM1GO15355 546 aaPredicted RBP3.5□□□□□ -1.85
PCM1-214ENST00000521338 ZRANB2O95218 330 aaKnown RBP eCLIP3.5□□□□□ -1.85
PCM1-214ENST00000521338 TGFB3P10600 412 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 IBSPP21815 317 aaPredicted RBP3.5□□□□□ -1.85
PCM1-214ENST00000521338 LRPAP1P30533 357 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 AMPD3Q01432 767 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 LMAN2Q12907 356 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 ODF1Q14990 250 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 AMOTQ4VCS5 1084 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 ANO7Q6IWH7 933 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 PRR18Q8N4B5 295 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 SIRT6Q8N6T7 355 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 ZCRB1Q8TBF4 217 aaKnown RBP3.5□□□□□ -1.85
PCM1-214ENST00000521338 NR4A3Q92570 626 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 CTHRC1Q96CG8 243 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 MESP1Q9BRJ9 268 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 BRINP2Q9C0B6 783 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 TMEM8AQ9HCN3 771 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 PCDH12Q9NPG4 1184 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 SEMA4BQ9NPR2 832 aaPredicted RBP3.5□□□□□ -1.85
PCM1-214ENST00000521338 XPR1Q9UBH6 696 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 SHOC2Q9UQ13 582 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 PLEKHM1Q9Y4G2 1056 aa3.5□□□□□ -1.85
PCM1-214ENST00000521338 TTBK1Q5TCY1 1321 aaPredicted RBP3.49□□□□□ -1.85
PCM1-214ENST00000521338 hCG_2014768A0A024R1R8 64 aa3.49□□□□□ -1.85
PCM1-214ENST00000521338 LACTBL1A8MY62 500 aa3.49□□□□□ -1.85
PCM1-214ENST00000521338 PMPCBO75439 489 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms