RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 OOSP2Q86WS3 158 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 RAET1EQ8TD07 263 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 NT5C1AQ9BXI3 368 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 PRMT7Q9NVM4 692 aaPredicted RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 TBX20Q9UMR3 447 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 HBS1LQ9Y450 684 aaKnown RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 M0R3G1 203 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 HBP1O60381 514 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 SRP72O76094 671 aaKnown RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ITGA4P13612 1032 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 SESN2P58004 480 aaPredicted RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ST8SIA6P61647 398 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 KRT35Q92764 455 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ERGIC2Q96RQ1 377 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 NWD1Q149M9 1564 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 H3BQF6 201 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 RAD51CO43502 376 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 BTKQ06187 659 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ATP1A4Q13733 1029 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 CCDC149Q6ZUS6 474 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 RSPH1Q8WYR4 309 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 PPP1R2P1Q96PQ5 205 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 PDCD10Q9BUL8 212 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ADAM30Q9UKF2 790 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 PCDHGA3Q9Y5H0 932 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 NFIBO00712 420 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 TADA2AO75478 443 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 FKBP9O95302 570 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 SEC24CP53992 1094 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ACTR2P61160 394 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 MPP3Q13368 585 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 FKBP9P1Q75LS8 142 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 JAMLQ86YT9 394 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 RNASE11Q8TAA1 199 aaKnown RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 PLGRKTQ9HBL7 147 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 DSEQ9UL01 958 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 RIMS1Q86UR5 1692 aaKnown RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ARMC3Q5W041 872 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 KIF2BQ8N4N8 673 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 CYGBQ8WWM9 190 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 CYP4F11Q9HBI6 524 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 RNF103O00237 685 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 JAK1P23458 1154 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 GTF2H1P32780 548 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 HEATR4Q86WZ0 1026 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 CAPSLQ8WWF8 208 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 FOXP3Q9BZS1 431 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 PTPAQ15257 358 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 DGKDQ16760 1214 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 GPAT2Q6NUI2 795 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 PGBD3Q8N328 593 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ZNF507Q8TCN5 953 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 LRRC39Q96DD0 335 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 METTL5Q9NRN9 209 aaKnown RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 DPEP1P16444 411 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 MUTP22033 750 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 SOX6P35712 828 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 KDELC2Q7Z4H8 507 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 TSPAN17Q96FV3 270 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 L1RE1Q9UN81 338 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 STON1Q9Y6Q2 735 aa12.53□□□□□ -0.4
ERGIC1-208ENST00000520399 KBTBD13C9JR72 458 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 CTSHP09668 335 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 CETPP11597 493 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 SOAT1P35610 550 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 SLC16A1P53985 500 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 ZNF200P98182 395 aaPredicted RBP12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 TMEM62Q0P6H9 643 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms