RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 GJA10Q969M2 543 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 SLC39A13Q96H72 371 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 CCDC43Q96MW1 224 aaKnown RBP8.84□□□□□ -0.99
SFXN1-211ENST00000515736 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 PDCD2LQ9BRP1 358 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 STRA6Q9BX79 667 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 PRO3102Q9H379 93 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 C11orf49Q9H6J7 331 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 RPAP3Q9H6T3 665 aaPredicted RBP8.84□□□□□ -0.99
SFXN1-211ENST00000515736 PRDM5Q9NQX1 630 aaPredicted RBP8.84□□□□□ -0.99
SFXN1-211ENST00000515736 FBXO28Q9NVF7 368 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 DMAC2Q9NW81 257 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 RGL1Q9NZL6 768 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 ARHGAP20Q9P2F6 1191 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 INTUQ9ULD6 942 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 GUCA1BQ9UMX6 200 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 FRMD4BQ9Y2L6 1034 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 PCDHA13Q9Y5I0 950 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 FRMPD3Q5JV73 1810 aa8.84□□□□□ -0.99
SFXN1-211ENST00000515736 NPHP3-ACAD11A0A0J9YXS1 232 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 TARSL2A2RTX5 802 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 GOLGA6CA6NDK9 693 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 GOLGA6BA6NDN3 693 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 NFIBO00712 420 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 DHX15O43143 795 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 LEFTY1O75610 366 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 CBX7O95931 251 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 GOLGA6DP0CG33 693 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 SRGAP2CP0DJJ0 459 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 MYBP10242 640 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 ARP10275 920 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 PLS3P13797 630 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 SYN1P17600 705 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 RPS6P62753 249 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 CETN1Q12798 172 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 FAPQ12884 760 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 CTTNQ14247 550 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 COG2Q14746 738 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 ASIC2Q16515 512 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 SLC18A3Q16572 532 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 INTS8Q75QN2 995 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 OTUD6AQ7L8S5 288 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 ZNF572Q7Z3I7 529 aaPredicted RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 USP37Q86T82 979 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 FAM186BQ8IYM0 893 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 KRT222Q8N1A0 295 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 CHST14Q8NCH0 376 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 CHST13Q8NET6 341 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 GPRC5AQ8NFJ5 357 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 NSUN6Q8TEA1 469 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 SOCS4Q8WXH5 440 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 TRIB2Q92519 343 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 ATP6V0A1Q93050 837 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 SLC35C1Q96A29 364 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 LENG1Q96BZ8 264 aaPredicted RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 PAGR1Q9BTK6 254 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 LSM14BQ9BX40 385 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 TEX13BQ9BXU2 312 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 GANQ9H2C0 597 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 PXMP2Q9NR77 195 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 THG1LQ9NWX6 298 aaKnown RBP8.83□□□□□ -1
SFXN1-211ENST00000515736 GOLGA6AQ9NYA3 693 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 HOXC10Q9NYD6 342 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 FAM53CQ9NYF3 392 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 TBC1D7Q9P0N9 293 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 RAB21Q9UL25 225 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 EXOC7Q9UPT5 735 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 ZMYM2Q9UBW7 1377 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 LRRC37A2A6NM11 1700 aa8.83□□□□□ -1
SFXN1-211ENST00000515736 PFASO15067 1338 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 A0A0U1RQG5 324 aaPredicted RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 PIK3R2O00459 728 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 CES2O00748 559 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 WNT9AO14904 365 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 TGFB1I1O43294 461 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 CHMP2AO43633 222 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 PEX10O60683 326 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 ULK1O75385 1050 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 NOL4O94818 638 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 PRPF6O94906 941 aaKnown RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 LCP1P13796 627 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 UCHL3P15374 230 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 FERP16591 822 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 ATP2A2P16615 1042 aaKnown RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 MAP4P27816 1152 aaKnown RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 BMP8BP34820 402 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 COPB2P35606 906 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 MAGEA1P43355 309 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 RARRES1P49788 294 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 KLK7P49862 253 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 SEPHS1P49903 392 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 CASP5P51878 434 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 POLR2FP61218 127 aaKnown RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 MRPS9P82933 396 aaKnown RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 OCRLQ01968 901 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 KCNAB2Q13303 367 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 GFOD2Q3B7J2 385 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 TDRD12Q587J7 1177 aaKnown RBP8.82□□□□□ -1
SFXN1-211ENST00000515736 WDR78Q5VTH9 848 aa8.82□□□□□ -1
SFXN1-211ENST00000515736 KLHDC7AQ5VTJ3 777 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms