RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 EFNA5P52803 228 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 RIPPLY3P57055 190 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 HDAC1Q13547 482 aaPredicted RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 GSE1Q14687 1217 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 KCNB1Q14721 858 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 DDR2Q16832 855 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 INAVAQ3KP66 663 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 SEZ6Q53EL9 994 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 CREB3L3Q68CJ9 461 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 RHBDF2Q6PJF5 856 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 LRRTM3Q86VH5 581 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 GATAD2AQ86YP4 633 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 CHPFQ8IZ52 775 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 BLIDQ8IZY5 108 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 OR10T2Q8NGX3 314 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 KCNE4Q8WWG9 221 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 CNDP2Q96KP4 475 aaKnown RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 IFT74Q96LB3 600 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 SENP8Q96LD8 212 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 ACO2Q99798 780 aaKnown RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 HSD17B14Q9BPX1 270 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 ZCWPW1Q9H0M4 648 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 OCEL1Q9H607 264 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 WSB2Q9NYS7 404 aaPredicted RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 HSPBP1Q9NZL4 362 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 CNTN3Q9P232 1028 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 TNFSF13BQ9Y275 285 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 ANKRD6Q9Y2G4 727 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 RAD54BQ9Y620 910 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 TSC2P49815 1807 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 LRBAP50851 2863 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 STK36Q9NRP7 1315 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 KIAA1549LQ6ZVL6 1849 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 PLXND1Q9Y4D7 1925 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 E2F8A0AVK6 867 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 H0Y8X5 98 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 LEFTY2O00292 366 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 SUV39H1O43463 412 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 PCDHGA12O60330 932 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 NFICP08651 508 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 C1SP09871 688 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 ADH5P11766 374 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 CDK4P11802 303 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 ODC1P11926 461 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 NAMPTP43490 491 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 GUCY2FP51841 1108 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 EXOSC10Q01780 885 aaKnown RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 NUCB1Q02818 461 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 PPP2R5AQ15172 486 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 TEAD4Q15561 434 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 SLC10A6Q3KNW5 377 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 PRAMEF14Q5SWL7 426 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 C10orf76Q5T2E6 689 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 FBXL19Q6PCT2 694 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 KDM7AQ6ZMT4 941 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 NUDT18Q6ZVK8 323 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 METTL23Q86XA0 190 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 THEM5Q8N1Q8 247 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 SPPL2BQ8TCT7 592 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 KCNV2Q8TDN2 545 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 OXER1Q8TDS5 423 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 LIN37Q96GY3 246 aaPredicted RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 MRGPRX1Q96LB2 322 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 MTMR9Q96QG7 549 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 ACOX2Q99424 681 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 ARHGAP9Q9BRR9 750 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 TARS2Q9BW92 718 aaKnown RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 RPF1Q9H9Y2 349 aaKnown RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 LRRC4CQ9HCJ2 640 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 UXTQ9UBK9 157 aaPredicted RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 DAXXQ9UER7 740 aaPredicted RBP7.78□□□□□ -1.16
VCAN-207ENST00000507162 MAN2B2Q9Y2E5 1009 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 PCDHB5Q9Y5E4 795 aa7.78□□□□□ -1.16
VCAN-207ENST00000507162 BLACEA4D250 179 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 CCDC169A6NNP5 214 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 PPEF2O14830 753 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 TADA3O75528 432 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 ADH1CP00326 375 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 MPOP05164 745 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 MCF2P10911 925 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 XRCC6P12956 609 aaKnown RBP eCLIP7.77□□□□□ -1.17
VCAN-207ENST00000507162 EIF2DP41214 584 aaKnown RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 AFF3P51826 1226 aaKnown RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 FOSBP53539 338 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 ZXDBP98169 803 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 TLE1Q04724 770 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 LY6G5CQ5SRR4 150 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 BTBD8Q5XKL5 378 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 EGFLAMQ63HQ2 1017 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 PADI6Q6TGC4 694 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 LAYNQ6UX15 382 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 DHX32Q7L7V1 743 aaKnown RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 ADAT2Q7Z6V5 191 aaKnown RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 NEK8Q86SG6 692 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 SLFN12Q8IYM2 578 aa7.77□□□□□ -1.17
VCAN-207ENST00000507162 DCP1BQ8IZD4 617 aaKnown RBP7.77□□□□□ -1.17
VCAN-207ENST00000507162 FSIP1Q8NA03 581 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms