RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 REEP2Q9BRK0 252 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 HTATIP2Q9BUP3 242 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 APOL6Q9BWW8 343 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ISCUQ9H1K1 167 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 RXFP1Q9HBX9 757 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 POLR3BQ9NW08 1133 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TAB2Q9NYJ8 693 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TBC1D14Q9P2M4 693 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TTC41PQ6P2S7 1318 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 A0A0G2JPF8 293 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 CDC14CA4D256 554 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 HNRNPCL3B7ZW38 293 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 CTAGE5O15320 804 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 QDPRP09417 244 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 HNRNPCL4P0DMR1 293 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 GABRB3P28472 473 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SLC6A9P48067 706 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SOX8P57073 446 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 RUNX1T1Q06455 604 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 GPR68Q15743 365 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ERMARDQ5T6L9 678 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TAF3Q5VWG9 929 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 EEF1DP3Q658K8 133 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TMC6Q7Z403 805 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 C12orf50Q8NA57 414 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 DLG3Q92796 817 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ADAD1Q96M93 576 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 YY1AP1Q9H869 796 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MID1IP1Q9NPA3 183 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 GLRX2Q9NS18 164 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 KCNH7Q9NS40 1196 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TBC1D7Q9P0N9 293 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 RUVBL1Q9Y265 456 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TMED5Q9Y3A6 229 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ADCY6O43306 1168 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 BUB1BO60566 1050 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TLR2O60603 784 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TMEM63AO94886 807 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ANXA1P04083 346 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 CLEC3BP05452 202 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 CCNA2P20248 432 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ASMTP46597 345 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 PITPNBP48739 271 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 GRIN1Q05586 938 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MPP3Q13368 585 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SUZ12Q15022 739 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MCMDC2Q4G0Z9 681 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MTHFD1LQ6UB35 978 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TMEM110Q86TL2 294 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 GAB3Q8WWW8 586 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ASB15Q8WXK1 588 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SSH1Q8WYL5 1049 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 CFAP36Q96G28 342 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TMX3Q96JJ7 454 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 PRRX2Q99811 253 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 VPS16Q9H269 839 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 HMG20BQ9P0W2 317 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TIMM13Q9Y5L4 95 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 EIF4G1Q04637 1599 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 RUSC2Q8N2Y8 1516 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 BTN3A1O00481 513 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ASAP2O43150 1006 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 PHF2O75151 1096 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TSC22D2O75157 780 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 DEAF1O75398 565 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MPOP05164 745 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ANXA2P07355 339 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TYRP14679 529 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 BMPR1AP36894 532 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 EIF4A1P60842 406 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 COG7P83436 770 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TFAP4Q01664 338 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SLC6A3Q01959 620 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 TEKQ02763 1124 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MYO1EQ12965 1108 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 RCN2Q14257 317 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 NOLC1Q14978 699 aaKnown RBP eCLIP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 MAPKAPK3Q16644 382 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ZNF628Q5EBL2 1059 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ATPAF1Q5TC12 328 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 LRCH2Q5VUJ6 765 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 GARNL3Q5VVW2 1013 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SLC25A24Q6NUK1 477 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 RABEPKQ7Z6M1 372 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 FAM71DQ8N9W8 422 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 C17orf50Q8WW18 174 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 CCDC43Q96MW1 224 aaKnown RBP5.57□□□□□ -1.52
NIPBL-204ENST00000504430 SPATA13Q96N96 652 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 ERP44Q9BS26 406 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 PCDHAC1Q9H158 963 aa5.57□□□□□ -1.52
NIPBL-204ENST00000504430 NPIPB15A6NHN6 443 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 SNAP23O00161 211 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PPEF2O14830 753 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 MCF2LO15068 1137 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 TP73O15350 636 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PPP6R2O75170 966 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 ITGA5P08648 1049 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 BMP4P12644 408 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 AVPR2P30518 371 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PPARGP37231 505 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms