RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 RIF1Q5UIP0 2472 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 CALUO43852 315 aaPredicted RBP14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 RHOBTB3O94955 611 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 HOXA6P31267 233 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 SRSF5Q13243 272 aaKnown RBP14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 ZNF699Q32M78 642 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 KRBA2Q6ZNG9 492 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 B3GALNT2Q8NCR0 500 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 SH3RF2Q8TEC5 729 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 RNF38Q9H0F5 515 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 ECT2Q9H8V3 914 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 ARHGAP26Q9UNA1 814 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 WNT6Q9Y6F9 365 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 GPR179Q6PRD1 2367 aa14.25□□□□□ -0.13
CTDSP1-212ENST00000494067 SPTBN4Q9H254 2564 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 PDXKO00764 312 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 FOXD2O60548 495 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 AKAP3O75969 853 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 RTN3O95197 1032 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 NFATC1O95644 943 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 RETP07949 1114 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 TCF3P15923 654 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 PGFP49763 221 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 GALK1P51570 392 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 NOP14P78316 857 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 NCOA4Q13772 614 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 LPAL2Q16609 132 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 RSPO4Q2I0M5 234 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 SGSM1Q2NKQ1 1148 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 GAB4Q2WGN9 574 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 ZACNQ401N2 412 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 ZCWPW2Q504Y3 356 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 WDR5BQ86VZ2 330 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 SMYD4Q8IYR2 804 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 PDZD8Q8NEN9 1154 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 CD101Q93033 1021 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 KCNK16Q96T55 309 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 MED10Q9BTT4 135 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 DNAI2Q9GZS0 605 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 LINC00597Q9H2U6 94 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 APOBEC3GQ9HC16 384 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 CDV3Q9UKY7 258 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 TRAF3IP3Q9Y228 551 aa14.24□□□□□ -0.13
CTDSP1-212ENST00000494067 ATG2BQ96BY7 2078 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 A0A1W2PQ27 194 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 A0A1W2PQ64 194 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 A0A1W2PQD8 194 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 ZNF840PA6NDX5 716 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 SLC9A3R1O14745 358 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 SCAMP3O14828 347 aaKnown RBP14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 HRO43593 1189 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 LRP3O75074 770 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 BEST1O76090 585 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 EGFP01133 1207 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 TGM1P22735 817 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 GJA4P35212 333 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 ASPAP45381 313 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 PPP3CAQ08209 521 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 IFRD2Q12894 506 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 EML3Q32P44 896 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 CEP135Q66GS9 1140 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 SV2AQ7L0J3 742 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 DDX42Q86XP3 938 aaKnown RBP eCLIP14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 NUP93Q8N1F7 819 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 CAMKK1Q8N5S9 505 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 KIAA1958Q8N8K9 716 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 ZMIZ2Q8NF64 920 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 TWNKQ96RR1 684 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 IMPG2Q9BZV3 1241 aa14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 SCAND2PQ9GZW5 306 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-212ENST00000494067 CCDC163A0A0D9SF12 145 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 RNF40O75150 1001 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 ZNF202O95125 648 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 OLFM2O95897 454 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 CCDC130P13994 396 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 YWHAQP27348 245 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 SPEM2Q0P670 501 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 MESP2Q0VG99 397 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 TAF10Q12962 218 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 ACOT1Q86TX2 421 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 CCDC150Q8NCX0 1101 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 TAF4BQ92750 862 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 ERCC4Q92889 916 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 FBXO32Q969P5 355 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 ACDQ96AP0 544 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 PARD6AQ9NPB6 346 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 DLL3Q9NYJ7 618 aa14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 EP300Q09472 2414 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-212ENST00000494067 LEFTY2O00292 366 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms