RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 KLHL30Q0D2K2 578 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 PSMD6Q15008 389 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 HABP4Q5JVS0 413 aaKnown RBP12.14□□□□□ -0.47
BRCA1-222ENST00000493919 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 LRRTM3Q86VH5 581 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 DDX42Q86XP3 938 aaKnown RBP eCLIP12.14□□□□□ -0.47
BRCA1-222ENST00000493919 IPCEF1Q8WWN9 437 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-222ENST00000493919 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 MYMKA6NI61 221 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 BECN2A8MW95 431 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 GOLGA8KD6RF30 607 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 GOLGA8TH3BQL2 631 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 NDC80O14777 642 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SLC16A4O15374 487 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 MTHFRP42898 656 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SYKP43405 635 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 NPTX2P47972 431 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 ZNF75DP51815 510 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 NDUFA8P51970 172 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 RABGGTBP53611 331 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 ADAM9Q13443 819 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 GIT2Q14161 759 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 ANO4Q32M45 955 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 P3H1Q32P28 736 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PPP1R21Q6ZMI0 780 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 CCDC81Q6ZN84 652 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SLC51BQ86UW2 128 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SCUBE1Q8IWY4 988 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 MYCT1Q8N699 235 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 LPIN3Q9BQK8 851 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 FAM117AQ9C073 453 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PIDD1Q9HB75 910 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 LARSQ9P2J5 1176 aaKnown RBP12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SNX9Q9Y5X1 595 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 COMMD3-BMI1R4GMX3 469 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 A0A1W2PQ27 194 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 A0A1W2PQ64 194 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 A0A1W2PQD8 194 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 CDK2AP1O14519 115 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 B4GALT5O43286 388 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 AP5Z1O43299 807 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 EXTL3O43909 919 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 TSPAN9O75954 239 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PRKCBP05771 671 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PLS3P13797 630 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PSMA4P25789 261 aaKnown RBP12.13□□□□□ -0.47
BRCA1-222ENST00000493919 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 TAS1R3Q7RTX0 852 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 RNF169Q8NCN4 708 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
BRCA1-222ENST00000493919 NFKBIZQ9BYH8 718 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 CARD9Q9H257 536 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SCPEP1Q9HB40 452 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 CCDC177Q9NQR7 707 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-222ENST00000493919 AGPAT5Q9NUQ2 364 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SIRT5Q9NXA8 310 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 PPP1R14DQ9NXH3 145 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 HMGXB4Q9UGU5 601 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
BRCA1-222ENST00000493919 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 KANSL1LA0AUZ9 987 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 K7ENM7 598 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 MATN2O00339 956 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 SOX1O00570 391 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 ENPP3O14638 875 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 CDK4P11802 303 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 PBX2P40425 430 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 AFMP43652 599 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 CD83Q01151 205 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 MAPK6Q16659 721 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 LRIT3Q3SXY7 679 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 RTN4RL1Q86UN2 441 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 ATL1Q8WXF7 558 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 INTS12Q96CB8 462 aaKnown RBP12.12□□□□□ -0.47
BRCA1-222ENST00000493919 IFT43Q96FT9 208 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 NSMCE3Q96MG7 304 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 TSGA13Q96PP4 275 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 TTC1Q99614 292 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 HAUS8Q9BT25 410 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
BRCA1-222ENST00000493919 HPSEQ9Y251 543 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms