RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 HPS4Q9NQG7 708 aa14.65□□□□□ -0.06
HDAC7-222ENST00000477937 MYO16Q9Y6X6 1858 aa14.65□□□□□ -0.06
HDAC7-222ENST00000477937 ZNF840PA6NDX5 716 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 PSMA7O14818 248 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 SLC16A3O15427 465 aaKnown RBP14.64□□□□□ -0.07
HDAC7-222ENST00000477937 LMNAP02545 664 aaKnown RBP14.64□□□□□ -0.07
HDAC7-222ENST00000477937 TCF3P15923 654 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 PPP1R2P41236 205 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 IFNAR2P48551 515 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 MXI1P50539 228 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 CCR3P51677 355 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 INCA1Q0VD86 236 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 USP4Q13107 963 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 ORC1Q13415 861 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 WDR44Q5JSH3 913 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 C12orf29Q8N999 325 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 PDZD8Q8NEN9 1154 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 SLC2A14Q8TDB8 520 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 SH3RF2Q8TEC5 729 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 OSCP1Q8WVF1 389 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 OVCA2Q8WZ82 227 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 ATP2A3Q93084 1043 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 FBXO32Q969P5 355 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 EXOC4Q96A65 974 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-222ENST00000477937 FAXDC2Q96IV6 333 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 NT5C1AQ9BXI3 368 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 KRT82Q9NSB4 513 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 FAM49BQ9NUQ9 324 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 COMMD8Q9NX08 183 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 DUS2Q9NX74 493 aaKnown RBP14.64□□□□□ -0.07
HDAC7-222ENST00000477937 HMGXB4Q9UGU5 601 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 ARHGAP26Q9UNA1 814 aa14.64□□□□□ -0.07
HDAC7-222ENST00000477937 USP34Q70CQ2 3546 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 TRIM49BA6NDI0 452 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 OTOL1A6NHN0 477 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 TNFRSF10BO14763 440 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 GADD45BO75293 160 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 CCDC130P13994 396 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 ARSAP15289 507 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 CXCL12P48061 93 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 SLC5A3P53794 718 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 NRLP54845 237 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 NR1H3Q13133 447 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 DCAF17Q5H9S7 520 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 ZC3H3Q8IXZ2 948 aaKnown RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 SPEM1Q8N4L4 309 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 CPA6Q8N4T0 437 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 CYFIP2Q96F07 1278 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 SMOQ99835 787 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 FAM126AQ9BYI3 521 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 RNF38Q9H0F5 515 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 ECT2Q9H8V3 914 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 CSNK1G1Q9HCP0 422 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 PRMT8Q9NR22 394 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 RBM12Q9NTZ6 932 aaKnown RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 RAB20Q9NX57 234 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 ZSCAN32Q9NX65 697 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 CHORDC1Q9UHD1 332 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-222ENST00000477937 MAN1B1Q9UKM7 699 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 PCDHGA2Q9Y5H1 932 aa14.63□□□□□ -0.07
HDAC7-222ENST00000477937 MYOFQ9NZM1 2061 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 LEFTY2O00292 366 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 TRDMT1O14717 391 aaKnown RBP14.62□□□□□ -0.07
HDAC7-222ENST00000477937 CILPO75339 1184 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 BEST1O76090 585 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 OAS1P00973 400 aaKnown RBP14.62□□□□□ -0.07
HDAC7-222ENST00000477937 FAM200BP0CF97 657 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 CD58P19256 250 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 MAP3K7CLP57077 242 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 SLC7A9P82251 487 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 GRSF1Q12849 480 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC7-222ENST00000477937 CCINQ13939 588 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 TSSK4Q6SA08 328 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 TTC39CQ8N584 583 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 ZMIZ2Q8NF64 920 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 SCAMP5Q8TAC9 235 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 SEMA4DQ92854 862 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 TWNKQ96RR1 684 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
HDAC7-222ENST00000477937 FBXO44Q9H4M3 255 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 METTL14Q9HCE5 456 aaKnown RBP14.62□□□□□ -0.07
HDAC7-222ENST00000477937 IL37Q9NZH6 218 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 ARMCX3Q9UH62 379 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-222ENST00000477937 CPQQ9Y646 472 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 WNT6Q9Y6F9 365 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 VPS13AQ96RL7 3174 aa14.62□□□□□ -0.07
HDAC7-222ENST00000477937 NFATC1O95644 943 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 OLFM2O95897 454 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 MBL2P11226 248 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-222ENST00000477937 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
HDAC7-222ENST00000477937 ADORA2BP29275 332 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 GJA4P35212 333 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 ZXDBP98169 803 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 GAS6Q14393 721 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 EML3Q32P44 896 aa14.61□□□□□ -0.07
HDAC7-222ENST00000477937 CBWD6Q4V339 395 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms