RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HLA-EP13747 358 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 EIF2DP41214 584 aaKnown RBP16.48■□□□□ 0.23
SMG5-204ENST00000476954 SRSF1Q07955 248 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMG5-204ENST00000476954 WDR45BQ5MNZ6 344 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 RINT1Q6NUQ1 792 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 DBX2Q6ZNG2 339 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
SMG5-204ENST00000476954 FAM181AQ8N9Y4 354 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 DRC1Q96MC2 740 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 CDC6Q99741 560 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 SEMA4CQ9C0C4 833 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 RNF38Q9H0F5 515 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 MIR1-1HGQ9H1L0 117 aa16.48■□□□□ 0.23
SMG5-204ENST00000476954 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
SMG5-204ENST00000476954 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.48■□□□□ 0.23
SMG5-204ENST00000476954 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 FLRT2O43155 660 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 HCRTO43612 131 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 ZNF217O75362 1048 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 OR52Z1P0C646 297 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 MUTP22033 750 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 MATKP42679 507 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 TAF6P49848 677 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 TSPY1Q01534 308 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 KCNC4Q03721 635 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 ZNF174Q15697 407 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 PTPRNQ16849 979 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 LY6G5CQ5SRR4 150 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 C10orf76Q5T2E6 689 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 EGFLAMQ63HQ2 1017 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 C1orf186Q6ZWK4 172 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 KCNK18Q7Z418 384 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 IPO4Q8TEX9 1081 aaKnown RBP16.47■□□□□ 0.23
SMG5-204ENST00000476954 BICD1Q96G01 975 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 KIF2CQ99661 725 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
SMG5-204ENST00000476954 CFAP97Q9P2B7 532 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 RAD54BQ9Y620 910 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 CPQQ9Y646 472 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 CYP46A1Q9Y6A2 500 aa16.47■□□□□ 0.23
SMG5-204ENST00000476954 TEX15Q9BXT5 2789 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
SMG5-204ENST00000476954 MEI4A8MW99 385 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 CER1O95813 267 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 PAX3P23760 479 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 NTSR1P30989 418 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 USP46P62068 366 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 PDIA5Q14554 519 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 TMEM132DQ14C87 1099 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
SMG5-204ENST00000476954 HAUS3Q68CZ6 603 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 DNASE2BQ8WZ79 361 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 FOXJ1Q92949 421 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 NXPE2Q96DL1 559 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 PKMYT1Q99640 499 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 GMIPQ9P107 970 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 DACH1Q9UI36 760 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 SLCO1B1Q9Y6L6 691 aa16.46■□□□□ 0.23
SMG5-204ENST00000476954 OGTO15294 1046 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 TULP3O75386 442 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 ADH1CP00326 375 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 CXADRP78310 365 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 KIAA1324Q6UXG2 1013 aaKnown RBP16.45■□□□□ 0.22
SMG5-204ENST00000476954 FMNL3Q8IVF7 1028 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 ETFBKMTQ8IXQ9 262 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 FSIP1Q8NA03 581 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
SMG5-204ENST00000476954 MRGPRX1Q96LB2 322 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 GPR174Q9BXC1 333 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 CCSER1Q9C0I3 900 aa16.45■□□□□ 0.22
SMG5-204ENST00000476954 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
SMG5-204ENST00000476954 A0A1B0GVT2 93 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
SMG5-204ENST00000476954 E9PAM4 449 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 RRP8O43159 456 aaKnown RBP16.44■□□□□ 0.22
SMG5-204ENST00000476954 TNFSF14O43557 240 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 NCAM1P13591 858 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 KRT10P13645 584 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 PLS3P13797 630 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 SLC7A9P82251 487 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 TAF1BQ53T94 588 aaPredicted RBP16.44■□□□□ 0.22
SMG5-204ENST00000476954 INTS6LQ5JSJ4 861 aaKnown RBP16.44■□□□□ 0.22
SMG5-204ENST00000476954 SCARA3Q6AZY7 606 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 OSTM1Q86WC4 334 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 PDCL2Q8N4E4 241 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 TOE1Q96GM8 510 aaKnown RBP16.44■□□□□ 0.22
SMG5-204ENST00000476954 TSPAN18Q96SJ8 248 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 ARID3AQ99856 593 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 C17orf75Q9HAS0 396 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 LRWD1Q9UFC0 647 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms