RNA–Protein interactions for RNA: ENST00000475779.1

SMO-203, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-203ENST00000475779 TXNDC11Q6PKC3 985 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
SMO-203ENST00000475779 SMYD4Q8IYR2 804 aaPredicted RBP12.83□□□□□ -0.36
SMO-203ENST00000475779 SYNPOQ8N3V7 929 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 RIN3Q8TB24 985 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 NELL1Q92832 810 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 ATP2A3Q93084 1043 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 EXOC4Q96A65 974 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 TSG101Q99816 390 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 SDCBP2Q9H190 292 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
SMO-203ENST00000475779 HPS4Q9NQG7 708 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 TMEM30AQ9NV96 361 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 TRPM5Q9NZQ8 1165 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 GCNT4Q9P109 453 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 MYH10P35580 1976 aa12.83□□□□□ -0.36
SMO-203ENST00000475779 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 CETN3O15182 167 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 OAS1P00973 400 aaKnown RBP12.82□□□□□ -0.36
SMO-203ENST00000475779 LMNAP02545 664 aaKnown RBP12.82□□□□□ -0.36
SMO-203ENST00000475779 BMP6P22004 513 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 USP46P62068 366 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 TNK2Q07912 1038 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 ADAM9Q13443 819 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 RUNX3Q13761 415 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 CCINQ13939 588 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 ANO6Q4KMQ2 910 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 KRT39Q6A163 491 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 SPEM1Q8N4L4 309 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 TTC39CQ8N584 583 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 ZBTB44Q8NCP5 570 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 TAS1R2Q8TE23 839 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 NAT10Q9H0A0 1025 aaKnown RBP12.82□□□□□ -0.36
SMO-203ENST00000475779 CYP3A43Q9HB55 503 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 PNPLA8Q9NP80 782 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 ZSCAN32Q9NX65 697 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 R4GN57 208 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 FAM186AA6NE01 2351 aa12.82□□□□□ -0.36
SMO-203ENST00000475779 FAM92AA1XBS5 289 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 C2orf78A6NCI8 922 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 ZNF840PA6NDX5 716 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CLDN5O00501 218 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 PSMA7O14818 248 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CAVIN2O95810 425 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 GCLMP48507 274 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 IFNAR2P48551 515 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 TUBP50607 506 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 NDST1P52848 882 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 SLC5A3P53794 718 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CACNA2D1P54289 1103 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CDH8P55286 799 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 SLC7A9P82251 487 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
SMO-203ENST00000475779 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 KLHL10Q6JEL2 608 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 C11orf57Q6ZUT1 292 aaPredicted RBP12.81□□□□□ -0.36
SMO-203ENST00000475779 DDX42Q86XP3 938 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMO-203ENST00000475779 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 FUKQ8N0W3 1084 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 ADSSL1Q8N142 457 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CRYBG2Q8N1P7 616 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 ARL14EPQ8N8R7 260 aaPredicted RBP12.81□□□□□ -0.36
SMO-203ENST00000475779 SH3RF2Q8TEC5 729 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 OSCP1Q8WVF1 389 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 SLC22A12Q96S37 553 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 EBF3Q9H4W6 596 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CSNK1G1Q9HCP0 422 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 GKN1Q9NS71 199 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 COMMD8Q9NX08 183 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CTNND2Q9UQB3 1225 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 CFAP54Q96N23 3096 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 ZNF292O60281 2723 aa12.81□□□□□ -0.36
SMO-203ENST00000475779 DMDP11532 3685 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 LILRB5O75023 590 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 CILPO75339 1184 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 AP1G2O75843 785 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 NFATC1O95644 943 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 TDGF1P13385 188 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 CCDC130P13994 396 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 HDCP19113 662 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 PRCPP42785 496 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 NRLP54845 237 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 FKBP3Q00688 224 aaKnown RBP12.8□□□□□ -0.36
SMO-203ENST00000475779 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
SMO-203ENST00000475779 TAF10Q12962 218 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 PAK1Q13153 545 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 PON2Q15165 354 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
SMO-203ENST00000475779 TRIM68Q6AZZ1 485 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms