RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 HEATR6Q6AI08 1181 aaKnown RBP21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 WDR5BQ86VZ2 330 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 PDZD8Q8NEN9 1154 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 OVCA2Q8WZ82 227 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 SLC8A2Q9UPR5 921 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 CCDC163A0A0D9SF12 145 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 PRR5-ARHGAP8B1AHC4 643 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 LEFTY2O00292 366 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 CLDN5O00501 218 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 SLC9A3R1O14745 358 aaPredicted RBP21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 HRO43593 1189 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 LRP3O75074 770 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 VNN1O95497 513 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 ABL1P00519 1130 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 EGFP01133 1207 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 RETP07949 1114 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 ARHGAP8P85298 464 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 DMWDQ09019 674 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 SCARA5Q6ZMJ2 495 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 DDX42Q86XP3 938 aaKnown RBP eCLIP21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 CD101Q93033 1021 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 SMARCD1Q96GM5 515 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 MED10Q9BTT4 135 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 C2orf42Q9NWW7 574 aa21.63■■□□□ 1.05
PDLIM4-206ENST00000474421 CACNA1AO00555 2505 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 MYH10P35580 1976 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 RNF40O75150 1001 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 OLFM2O95897 454 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 RPL13P26373 211 aaKnown RBP21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 RAP1GAPP47736 663 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 CACNA2D1P54289 1103 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 DLG4P78352 724 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 ENPEPQ07075 957 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 DPYDQ12882 1025 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 KRBA2Q6ZNG9 492 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 INTS8Q75QN2 995 aaKnown RBP21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 SV2AQ7L0J3 742 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 FAM35AQ86V20 835 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 UNC93AQ86WB7 457 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 IMPG2Q9BZV3 1241 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 DMAP1Q9NPF5 467 aaPredicted RBP21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 TMEM30AQ9NV96 361 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 COMMD8Q9NX08 183 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 DLL3Q9NYJ7 618 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 USP18Q9UMW8 372 aa21.62■■□□□ 1.05
PDLIM4-206ENST00000474421 ASS1P00966 412 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 OAS1P00973 400 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 PRR29P0C7W0 189 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 KRT13P13646 458 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 NR2F2P24468 414 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 PIK3CAP42336 1068 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 VAMP7P51809 220 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 IFRD2Q12894 506 aaPredicted RBP21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 LPAL2Q16609 132 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 CEP68Q76N32 757 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 DGLUCYQ7Z3D6 616 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 GUF1Q8N442 669 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 CAMKK1Q8N5S9 505 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 FBXO32Q969P5 355 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 CHAMP1Q96JM3 812 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 RNF38Q9H0F5 515 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 LINC00597Q9H2U6 94 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 FBRSL1Q9HCM7 1045 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 GTF3C3Q9Y5Q9 886 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 CPQQ9Y646 472 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 RALGAPA1Q6GYQ0 2036 aa21.61■■□□□ 1.05
PDLIM4-206ENST00000474421 ZNF202O95125 648 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 RSPO4Q2I0M5 234 aaPredicted RBP21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 PKN3Q6P5Z2 889 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 ACOT1Q86TX2 421 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 CRYBG2Q8N1P7 616 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 ACDQ96AP0 544 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 KCNK16Q96T55 309 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 DNAI2Q9GZS0 605 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 SDCBP2Q9H190 292 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 SPAG17Q6Q759 2223 aa21.6■■□□□ 1.05
PDLIM4-206ENST00000474421 AP1G2O75843 785 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 HLA-DRAP01903 254 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 MBL2P11226 248 aaPredicted RBP21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 TGM1P22735 817 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 TUBP50607 506 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 ZXDBP98169 803 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 HECTD3Q5T447 861 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 SNX30Q5VWJ9 437 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 PAQR9Q6ZVX9 377 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 FUKQ8N0W3 1084 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 KRT82Q9NSB4 513 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 SMPD4Q9NXE4 827 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 IL37Q9NZH6 218 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 DNAH14Q0VDD8 3507 aa21.59■■□□□ 1.05
PDLIM4-206ENST00000474421 TNFRSF10BO14763 440 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 FOXD2O60548 495 aaPredicted RBP21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 AKAP3O75969 853 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 PSMC2P35998 433 aaKnown RBP21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 NDST1P52848 882 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 SLC5A3P53794 718 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 SPEM2Q0P670 501 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 SRSF5Q13243 272 aaKnown RBP21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 C1orf220Q5T0J3 134 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms