RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 GLUD1P00367 558 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 EPCAMP16422 314 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 RRM1P23921 792 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 VAV2P52735 878 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 C1QBPQ07021 282 aaKnown RBP20.23■□□□□ 0.83
PSPC1-203ENST00000471658 ADIGQ0VDE8 80 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 MTMR3Q13615 1198 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 GRIN2CQ14957 1233 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 C10orf76Q5T2E6 689 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 XYLT1Q86Y38 959 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 TCEAL8Q8IYN2 117 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 KREMEN2Q8NCW0 462 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 SLC22A17Q8WUG5 538 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 KCTD13Q8WZ19 329 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 ZNF653Q96CK0 615 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 MRPL38Q96DV4 380 aaKnown RBP20.23■□□□□ 0.83
PSPC1-203ENST00000471658 PIWIL1Q96J94 861 aaKnown RBP20.23■□□□□ 0.83
PSPC1-203ENST00000471658 FBXW11Q9UKB1 542 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 YIPF1Q9Y548 306 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 PLXNA3P51805 1871 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 ATG2AQ2TAZ0 1938 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 TRANK1O15050 2925 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 TRIM66O15016 1216 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 PAPSS1O43252 624 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-203ENST00000471658 CCDC175P0C221 793 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 GTF2F1P35269 517 aaKnown RBP eCLIP20.22■□□□□ 0.83
PSPC1-203ENST00000471658 TUFMP49411 452 aaKnown RBP20.22■□□□□ 0.83
PSPC1-203ENST00000471658 SLC5A3P53794 718 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 GPC5P78333 572 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 RBM10P98175 930 aaKnown RBP20.22■□□□□ 0.83
PSPC1-203ENST00000471658 IFRD2Q12894 506 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-203ENST00000471658 RAB41Q5JT25 222 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 OR6B2Q6IFH4 312 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 FAM183BPQ6ZVS7 135 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 LRRC4Q9HBW1 653 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 CNOT8Q9UFF9 292 aaKnown RBP20.22■□□□□ 0.83
PSPC1-203ENST00000471658 ZKSCAN5Q9Y2L8 839 aa20.22■□□□□ 0.83
PSPC1-203ENST00000471658 GOLGA8SH3BPF8 625 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 TMEM253P0C7T8 217 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 NRIP1P48552 1158 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 TKTL1P51854 596 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 USP46P62068 366 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 TWF1Q12792 350 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 REXO1L1PQ8IX06 675 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 SLC7A14Q8TBB6 771 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 KIAA1524Q8TCG1 905 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 IPO4Q8TEX9 1081 aaKnown RBP20.21■□□□□ 0.83
PSPC1-203ENST00000471658 VCPIP1Q96JH7 1222 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 ULBP1Q9BZM6 244 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 TLE6Q9H808 572 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 SALL4Q9UJQ4 1053 aa20.21■□□□□ 0.83
PSPC1-203ENST00000471658 CALB1P05937 261 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 ARHGAP25P42331 645 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 ACADSBP45954 432 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 RPL10AP62906 217 aaKnown RBP20.2■□□□□ 0.82
PSPC1-203ENST00000471658 TAF5Q15542 800 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 PTPROQ16827 1216 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 NUP93Q8N1F7 819 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 CTNNBL1Q8WYA6 563 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-203ENST00000471658 FAM161BQ96MY7 647 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 PNPLA8Q9NP80 782 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 HSFX1Q9UBD0 423 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 INTUQ9ULD6 942 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 INSL5Q9Y5Q6 135 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 MYO9BQ13459 2157 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 TCRBV5S1A1TA0A578 114 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 PJA2O43164 708 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 CYP1A2P05177 515 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 ZNF268Q14587 947 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-203ENST00000471658 DUSP6Q16828 381 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 LIN9Q5TKA1 542 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 PPP1R2P3Q6NXS1 205 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 CCAR2Q8N163 923 aaKnown RBP20.2■□□□□ 0.82
PSPC1-203ENST00000471658 MSANTD4Q8NCY6 345 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 MCRS1Q96EZ8 462 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 SPATA17Q96L03 361 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 LUC7LQ9NQ29 371 aaKnown RBP20.2■□□□□ 0.82
PSPC1-203ENST00000471658 LZTFL1Q9NQ48 299 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 CYLDQ9NQC7 956 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 MAN1C1Q9NR34 630 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 HCFC2Q9Y5Z7 792 aa20.2■□□□□ 0.82
PSPC1-203ENST00000471658 SLC38A8A6NNN8 435 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 C8AP07357 584 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 ALDH1A3P47895 512 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 SIX6OS1Q8N1H7 587 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 FEZF2Q8TBJ5 459 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 KHSRPQ92945 711 aaKnown RBP eCLIP20.19■□□□□ 0.827e-7■■■□□ 16.1
PSPC1-203ENST00000471658 IGFLR1Q9H665 355 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 OSGEPQ9NPF4 335 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 MAFFQ9ULX9 164 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 COG5Q9UP83 839 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 PAXBP1Q9Y5B6 917 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 USP3Q9Y6I4 520 aa20.19■□□□□ 0.82
PSPC1-203ENST00000471658 GRAP2O75791 330 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 MYBL1P10243 752 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 PGFP49763 221 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 MAMLD1Q13495 774 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 ADGRE1Q14246 886 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 TCEAL5Q5H9L2 206 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms