RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 IRF7Q92985 503 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 KAT5Q92993 513 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
PTMA-211ENST00000468027 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 FAM83CQ9BQN1 747 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 RNF38Q9H0F5 515 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 TBC1D17Q9HA65 648 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 DMAP1Q9NPF5 467 aaPredicted RBP13.76□□□□□ -0.21
PTMA-211ENST00000468027 HEBP1Q9NRV9 189 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 TDP1Q9NUW8 608 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 CNTN6Q9UQ52 1028 aa13.76□□□□□ -0.21
PTMA-211ENST00000468027 MTF2Q9Y483 593 aaPredicted RBP13.76□□□□□ -0.21
PTMA-211ENST00000468027 ATP8B3O60423 1300 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 RTN3O95197 1032 aaPredicted RBP13.75□□□□□ -0.21
PTMA-211ENST00000468027 CCDC192P0DO97 292 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 PPP3CCP48454 512 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 NUBP1P53384 320 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 USP4Q13107 963 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 ARHGEF19Q8IW93 802 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 CCDC105Q8IYK2 499 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 ARL14EPQ8N8R7 260 aaPredicted RBP13.75□□□□□ -0.21
PTMA-211ENST00000468027 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 ZFRQ96KR1 1074 aaKnown RBP13.75□□□□□ -0.21
PTMA-211ENST00000468027 KREMEN1Q96MU8 473 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 ZSWIM1Q9BR11 485 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 MED10Q9BTT4 135 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 DUSP16Q9BY84 665 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 BRD9Q9H8M2 597 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 PNPLA8Q9NP80 782 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 EHD2Q9NZN4 543 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.75□□□□□ -0.215e-24■■□□□ 12.3
PTMA-211ENST00000468027 USP3Q9Y6I4 520 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 LAMA1P25391 3075 aa13.75□□□□□ -0.21
PTMA-211ENST00000468027 KANSL1LA0AUZ9 987 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 OTOL1A6NHN0 477 aaPredicted RBP13.74□□□□□ -0.21
PTMA-211ENST00000468027 ZNF263O14978 683 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 FGFR1OPO95684 399 aaKnown RBP13.74□□□□□ -0.21
PTMA-211ENST00000468027 TBXAS1P24557 533 aaPredicted RBP13.74□□□□□ -0.21
PTMA-211ENST00000468027 YWHAQP27348 245 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 ADORA2BP29275 332 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 AVPR1AP37288 418 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 ZNF132P52740 706 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 SLC7A9P82251 487 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 GCNT1Q02742 428 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 LRMPQ12912 555 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 PKDCCQ504Y2 493 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 ARHGAP29Q52LW3 1261 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 TTC30AQ86WT1 665 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 FLCNQ8NFG4 579 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 OSBPL6Q9BZF3 934 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 UBXN6Q9BZV1 441 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 KIF9Q9HAQ2 790 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 HPS4Q9NQG7 708 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 TRPM5Q9NZQ8 1165 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 ARHGAP26Q9UNA1 814 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 HCN4Q9Y3Q4 1203 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 ZNF292O60281 2723 aa13.74□□□□□ -0.21
PTMA-211ENST00000468027 DMXL1Q9Y485 3027 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
PTMA-211ENST00000468027 CLSTN1O94985 981 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 USP17L7P0C7H9 530 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 FAM200BP0CF97 657 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 HDCP19113 662 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 CD72P21854 359 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 KIF11P52732 1056 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 TNK2Q07912 1038 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 ANKRD52Q8NB46 1076 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 CLDN23Q96B33 292 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 SHDQ96IW2 340 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 HEXIM2Q96MH2 286 aaKnown RBP13.73□□□□□ -0.21
PTMA-211ENST00000468027 SLITRK1Q96PX8 696 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
PTMA-211ENST00000468027 MFSD1Q9H3U5 465 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 LTB4R2Q9NPC1 389 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 SIX2Q9NPC8 291 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 OSER1Q9NX31 292 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 GTSE1Q9NYZ3 720 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 TMEM63CQ9P1W3 806 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 CHORDC1Q9UHD1 332 aaPredicted RBP13.73□□□□□ -0.21
PTMA-211ENST00000468027 SCML2Q9UQR0 700 aa13.73□□□□□ -0.21
PTMA-211ENST00000468027 TULP2O00295 520 aa13.72□□□□□ -0.21
PTMA-211ENST00000468027 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
PTMA-211ENST00000468027 GABBR2O75899 941 aa13.72□□□□□ -0.21
PTMA-211ENST00000468027 SLC9A1P19634 815 aa13.72□□□□□ -0.21
PTMA-211ENST00000468027 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
PTMA-211ENST00000468027 TUBP50607 506 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms