RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 KIAA1324Q6UXG2 1013 aaKnown RBP12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CCDC81Q6ZN84 652 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 ADGRG2Q8IZP9 1017 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CEP120Q8N960 986 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS26A-204ENST00000467852 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CNTN3Q9P232 1028 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 ANKRD6Q9Y2G4 727 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CENPEQ02224 2701 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 KCNK3O14649 394 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 SLC9A3R1O14745 358 aaPredicted RBP12.6□□□□□ -0.39
VPS26A-204ENST00000467852 DFNA5O60443 496 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 USO1O60763 962 aaKnown RBP12.6□□□□□ -0.39
VPS26A-204ENST00000467852 SLITRK3O94933 977 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 EDN1P05305 212 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 HAPLN1P10915 354 aaPredicted RBP12.6□□□□□ -0.39
VPS26A-204ENST00000467852 AFMP43652 599 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 ACADVLP49748 655 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 CDR1P51861 262 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS26A-204ENST00000467852 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 ILKQ13418 452 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 KCNB1Q14721 858 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 ARL14EPQ8N8R7 260 aaPredicted RBP12.6□□□□□ -0.39
VPS26A-204ENST00000467852 DEPTORQ8TB45 409 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 SPPL2BQ8TCT7 592 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 ERLEC1Q96DZ1 483 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
VPS26A-204ENST00000467852 LRBAP50851 2863 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 H0Y8X5 98 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 CBX4O00257 560 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 LAD1O00515 517 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 PAPSS1O43252 624 aaPredicted RBP12.59□□□□□ -0.39
VPS26A-204ENST00000467852 ADH1CP00326 375 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 NFICP08651 508 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 HDCP19113 662 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 CDC27P30260 824 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 OXTRP30559 389 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 RARRES1P49788 294 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 PDE6CP51160 858 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 NLRP5P59047 1200 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 IL9RQ01113 521 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
VPS26A-204ENST00000467852 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
VPS26A-204ENST00000467852 NT5DC1Q5TFE4 455 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 KDM7AQ6ZMT4 941 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 FILIP1Q7Z7B0 1213 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 C12orf40Q86WS4 652 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 CHPFQ8IZ52 775 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 FSIP1Q8NA03 581 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS26A-204ENST00000467852 MCPH1Q8NEM0 835 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 C1orf216Q8TAB5 229 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
VPS26A-204ENST00000467852 ARHGAP26Q9UNA1 814 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 TNFSF13BQ9Y275 285 aa12.59□□□□□ -0.39
VPS26A-204ENST00000467852 SETD2Q9BYW2 2564 aaPredicted RBP12.59□□□□□ -0.39
VPS26A-204ENST00000467852 LYPLA2O95372 231 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 ITGB6P18564 788 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 AARSP49588 968 aaKnown RBP eCLIP12.58□□□□□ -0.4
VPS26A-204ENST00000467852 EFNA5P52803 228 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 ATP2C1P98194 919 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-204ENST00000467852 LINC00303Q3SY05 128 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 SGO2Q562F6 1265 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 C10orf76Q5T2E6 689 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
VPS26A-204ENST00000467852 LRRC15Q8TF66 581 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 SNX19Q92543 992 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-204ENST00000467852 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 SEMA3CQ99985 751 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 SLC6A17Q9H1V8 727 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 KCNMB3Q9NPA1 279 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 THSD1Q9NS62 852 aa12.58□□□□□ -0.4
VPS26A-204ENST00000467852 ABI2Q9NYB9 513 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-204ENST00000467852 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 CCER2I3L3R5 266 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 LEFTY2O00292 366 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
VPS26A-204ENST00000467852 SLC37A4O43826 429 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 TADA3O75528 432 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
VPS26A-204ENST00000467852 MPOP05164 745 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 ADH5P11766 374 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 ODC1P11926 461 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 NAMPTP43490 491 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 GRIA4P48058 902 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 GABREP78334 506 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 PPP2R5AQ15172 486 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 KRTAP21-3Q3LHN1 58 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 BTBD8Q5XKL5 378 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 RHBDF2Q6PJF5 856 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 DHX32Q7L7V1 743 aaKnown RBP12.57□□□□□ -0.4
VPS26A-204ENST00000467852 KIAA1958Q8N8K9 716 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms