RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 CCDC175P0C221 793 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 EPCAMP16422 314 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 MMP8P22894 467 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 TKTL1P51854 596 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
NUP188-204ENST00000467044 ADIGQ0VDE8 80 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 TWF1Q12792 350 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 SIX6OS1Q8N1H7 587 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 STKLD1Q8NE28 680 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
NUP188-204ENST00000467044 KCTD13Q8WZ19 329 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 ZNF653Q96CK0 615 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 SLC4A5Q9BY07 1137 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
NUP188-204ENST00000467044 HSFX1Q9UBD0 423 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 FBXW11Q9UKB1 542 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 MAGED2Q9UNF1 606 aaPredicted RBP11.32□□□□□ -0.6
NUP188-204ENST00000467044 TFR2Q9UP52 801 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 REXO2Q9Y3B8 237 aaKnown RBP11.32□□□□□ -0.6
NUP188-204ENST00000467044 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 INSL5Q9Y5Q6 135 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 CHD7Q9P2D1 2997 aa11.32□□□□□ -0.6
NUP188-204ENST00000467044 SLC38A8A6NNN8 435 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
NUP188-204ENST00000467044 GABBR2O75899 941 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 ATF6P18850 670 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 IGFBP4P22692 258 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 RRM1P23921 792 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 GABRB2P47870 512 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 VAV2P52735 878 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 SLC5A3P53794 718 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 EPHB3P54753 998 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 GPC5P78333 572 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 PLD1Q13393 1074 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 MTMR3Q13615 1198 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 VEPH1Q14D04 833 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 DUSP6Q16828 381 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 HS1BP3Q53T59 392 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 ELMSAN1Q6PJG2 1045 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 MON1BQ7L1V2 547 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 TMEM110Q86TL2 294 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 TXLNBQ8N3L3 684 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 NDRG1Q92597 394 aaKnown RBP11.31□□□□□ -0.6
NUP188-204ENST00000467044 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 SPATA17Q96L03 361 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 ULBP1Q9BZM6 244 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 THAP2Q9H0W7 228 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 PLEKHA4Q9H4M7 779 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 PNPLA8Q9NP80 782 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 CYLDQ9NQC7 956 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 MAN1C1Q9NR34 630 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 TRMT1Q9NXH9 659 aaKnown RBP11.31□□□□□ -0.6
NUP188-204ENST00000467044 CNOT8Q9UFF9 292 aaKnown RBP11.31□□□□□ -0.6
NUP188-204ENST00000467044 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 PPP2R2CQ9Y2T4 447 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
NUP188-204ENST00000467044 TNFRSF10BO14763 440 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 PAPSS1O43252 624 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 USP17L7P0C7H9 530 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 CSH1P0DML2 217 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 CSH2P0DML3 217 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 MYBL1P10243 752 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
NUP188-204ENST00000467044 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 RNASE9P60153 205 aaKnown RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 KIF5AQ12840 1032 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 ZNF268Q14587 947 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 TCEAL5Q5H9L2 206 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 RAB41Q5JT25 222 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 ELMOD1Q8N336 334 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 MICALL1Q8N3F8 863 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 CLEC4CQ8WTT0 213 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 ARHGEF26Q96DR7 871 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 GAS2L1Q99501 681 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 SELENOOQ9BVL4 669 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 FBXO44Q9H4M3 255 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 CNGB3Q9NQW8 809 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 LMCD1Q9NZU5 365 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 WDR35Q9P2L0 1181 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 CHORDC1Q9UHD1 332 aaPredicted RBP11.3□□□□□ -0.6
NUP188-204ENST00000467044 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
NUP188-204ENST00000467044 INTUQ9ULD6 942 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms