RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZNF518BQ9C0D4 1074 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 EPC1Q9H2F5 836 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 KCTD10Q9H3F6 313 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 HPS4Q9NQG7 708 aa22.99■■□□□ 1.27
C9orf3-208ENST00000451893 VPS13AQ96RL7 3174 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 BECN2A8MW95 431 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 GOLGA6L19H0YKK7 550 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 IKBKBO14920 756 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 ATG13O75143 517 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 NR2F2P24468 414 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 RPL13P26373 211 aaKnown RBP22.98■■□□□ 1.27
C9orf3-208ENST00000451893 PPP1R2P41236 205 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 IQCB1Q15051 598 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 SGSM1Q2NKQ1 1148 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 DPCR1Q3MIW9 517 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 OSCP1Q8WVF1 389 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 DNAI2Q9GZS0 605 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 MMRN2Q9H8L6 949 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 SLC8A2Q9UPR5 921 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 MAPK8IP1Q9UQF2 711 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 WNT6Q9Y6F9 365 aa22.98■■□□□ 1.27
C9orf3-208ENST00000451893 CHURC1-FNTBB4DL54 471 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 CLDN5O00501 218 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 LILRB5O75023 590 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 RTN3O95197 1032 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-208ENST00000451893 PFKLP17858 780 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 ERCC5P28715 1186 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-208ENST00000451893 FNTBP49356 437 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 CDH8P55286 799 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 TPM4P67936 248 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 NOP14P78316 857 aaKnown RBP22.97■■□□□ 1.27
C9orf3-208ENST00000451893 USP4Q13107 963 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 ZNF77Q15935 545 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 LPAL2Q16609 132 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 C11orf57Q6ZUT1 292 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-208ENST00000451893 CEP68Q76N32 757 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 GPR161Q8N6U8 529 aaKnown RBP22.97■■□□□ 1.27
C9orf3-208ENST00000451893 PLEKHO2Q8TD55 490 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 TMC2Q8TDI7 906 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 SLC22A12Q96S37 553 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 P2RY13Q9BPV8 354 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 XYLT2Q9H1B5 865 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 ECT2Q9H8V3 914 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 DMAC2Q9NW81 257 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 USP18Q9UMW8 372 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 ATG2BQ96BY7 2078 aa22.97■■□□□ 1.27
C9orf3-208ENST00000451893 RHOBTB3O94955 611 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 NFATC1O95644 943 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 C4BPAP04003 597 aaKnown RBP22.96■■□□□ 1.27
C9orf3-208ENST00000451893 VAMP7P51809 220 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 USP46P62068 366 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 DLG4P78352 724 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 TAF10Q12962 218 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 CCINQ13939 588 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 SIM2Q14190 667 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-208ENST00000451893 GAS6Q14393 721 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 ZNF658Q5TYW1 1059 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-208ENST00000451893 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-208ENST00000451893 NUP93Q8N1F7 819 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 PDZD8Q8NEN9 1154 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 TAF4BQ92750 862 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 NELL1Q92832 810 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 FBXO32Q969P5 355 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 SMARCD1Q96GM5 515 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 B3GNT5Q9BYG0 378 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 NACA2Q9H009 215 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 VRTNQ9H8Y1 702 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 ARHGAP26Q9UNA1 814 aa22.96■■□□□ 1.27
C9orf3-208ENST00000451893 EP300Q09472 2414 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-208ENST00000451893 MBL2P11226 248 aaPredicted RBP22.95■■□□□ 1.26
C9orf3-208ENST00000451893 DRD1P21728 446 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 YWHAQP27348 245 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 TMEM196Q5HYL7 178 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 INTS8Q75QN2 995 aaKnown RBP22.95■■□□□ 1.26
C9orf3-208ENST00000451893 FAM35AQ86V20 835 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 LONP2Q86WA8 852 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 DMAP1Q9NPF5 467 aaPredicted RBP22.95■■□□□ 1.26
C9orf3-208ENST00000451893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.95■■□□□ 1.26
C9orf3-208ENST00000451893 GCNT4Q9P109 453 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 TRAF3IP3Q9Y228 551 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 NME7Q9Y5B8 376 aa22.95■■□□□ 1.26
C9orf3-208ENST00000451893 TRDMT1O14717 391 aaKnown RBP22.94■■□□□ 1.26
C9orf3-208ENST00000451893 BMP6P22004 513 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 CNR2P34972 360 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 GJA4P35212 333 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 CLDN10P78369 228 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 ZACNQ401N2 412 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 SV2AQ7L0J3 742 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 ACOT1Q86TX2 421 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 DDX42Q86XP3 938 aaKnown RBP eCLIP22.94■■□□□ 1.26
C9orf3-208ENST00000451893 FAM186BQ8IYM0 893 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 RIN3Q8TB24 985 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 CD101Q93033 1021 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 ELMO3Q96BJ8 720 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 TTLL2Q9BWV7 592 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 KRT82Q9NSB4 513 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 SMPD4Q9NXE4 827 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 CPQQ9Y646 472 aa22.94■■□□□ 1.26
C9orf3-208ENST00000451893 CFAP54Q96N23 3096 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 DMDP11532 3685 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms