RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CHRNB1P11230 501 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 SLC7A9P82251 487 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 TNK2Q07912 1038 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 USP4Q13107 963 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 RUNX3Q13761 415 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 LRRC32Q14392 662 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 MTF1Q14872 753 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 WDR44Q5JSH3 913 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 DGKKQ5KSL6 1271 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 SNX30Q5VWJ9 437 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 ZC3H14Q6PJT7 736 aaKnown RBP19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 FRMD5Q7Z6J6 570 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 FILIP1Q7Z7B0 1213 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 SLC2A14Q8TDB8 520 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 OSCP1Q8WVF1 389 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 SEMA4DQ92854 862 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 NKD2Q969F2 451 aaPredicted RBP19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 LMAN1LQ9HAT1 526 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 HPS4Q9NQG7 708 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 KRT82Q9NSB4 513 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 CACNA1IQ9P0X4 2223 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 BICDL2A1A5D9 508 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 PPP1R3GB7ZBB8 358 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 AP1G2O75843 785 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 OAS1P00973 400 aaKnown RBP19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 CD44P16070 742 aaKnown RBP19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 BMP6P22004 513 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 SOX9P48436 509 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 MTAPQ13126 283 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 TCERG1LQ5VWI1 586 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 SYNPOQ8N3V7 929 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 C12orf29Q8N999 325 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 TRIML1Q8N9V2 468 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 RIN3Q8TB24 985 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 WHAMMQ8TF30 809 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 SLC35C1Q96A29 364 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 TWNKQ96RR1 684 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 PNPLA8Q9NP80 782 aa19.96■□□□□ 0.79
ATPAF2-201ENST00000444058 ZFHX2Q9C0A1 2572 aaPredicted RBP19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 PMM2O15305 246 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 GFRA3O60609 400 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 CCDC130P13994 396 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 TUBP50607 506 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 SLC5A3P53794 718 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 CBWD6Q4V339 395 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 DCAF17Q5H9S7 520 aaPredicted RBP19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 CBWD3Q5JTY5 395 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 CBWD5Q5RIA9 395 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 ISM2Q6H9L7 571 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 TTI2Q6NXR4 508 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 TXNDC11Q6PKC3 985 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 ZMIZ2Q8NF64 920 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 SH3RF2Q8TEC5 729 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 FBXO32Q969P5 355 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 CYFIP2Q96F07 1278 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 SMOQ99835 787 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 FAM126AQ9BYI3 521 aaPredicted RBP19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 FBXO44Q9H4M3 255 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 EBF3Q9H4W6 596 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.95■□□□□ 0.784e-61■■■■■ 745.3
ATPAF2-201ENST00000444058 PRMT8Q9NR22 394 aaPredicted RBP19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 DUS2Q9NX74 493 aaKnown RBP19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 ANAPC1Q9H1A4 1944 aa19.95■□□□□ 0.78
ATPAF2-201ENST00000444058 ZDHHC11BP0C7U3 371 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 FAM200BP0CF97 657 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 ANP32AP39687 249 aaKnown RBP19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 ORC1Q13415 861 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 CCINQ13939 588 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 PPP2R5DQ14738 602 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 CPA6Q8N4T0 437 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 SCAMP5Q8TAC9 235 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 TTC8Q8TAM2 541 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 NELL1Q92832 810 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 ATP2A3Q93084 1043 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 EXOC4Q96A65 974 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 RNF38Q9H0F5 515 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 FAM49BQ9NUQ9 324 aa19.94■□□□□ 0.78
ATPAF2-201ENST00000444058 PATJQ8NI35 1801 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 PRR23AA6NEV1 266 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 OTOL1A6NHN0 477 aaPredicted RBP19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 TRDMT1O14717 391 aaKnown RBP19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 BEST1O76090 585 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 GNA14O95837 355 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 CD58P19256 250 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 CCR3P51677 355 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 TRIM68Q6AZZ1 485 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 CLEC20AQ6ZU45 233 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 DDX42Q86XP3 938 aaKnown RBP eCLIP19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 SPEM1Q8N4L4 309 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 NELFBQ8WX92 580 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 DUSP9Q99956 384 aaKnown RBP19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 ECT2Q9H8V3 914 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 CISHQ9NSE2 258 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 PCDHGA2Q9Y5H1 932 aa19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 ZNF638Q14966 1978 aaKnown RBP19.93■□□□□ 0.78
ATPAF2-201ENST00000444058 LEFTY2O00292 366 aa19.92■□□□□ 0.78
ATPAF2-201ENST00000444058 P4HA2O15460 535 aa19.92■□□□□ 0.78
ATPAF2-201ENST00000444058 ABL1P00519 1130 aa19.92■□□□□ 0.78
ATPAF2-201ENST00000444058 ADORA2BP29275 332 aa19.92■□□□□ 0.78
ATPAF2-201ENST00000444058 IFNAR2P48551 515 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms