RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ZBED1O96006 694 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 EGFRP00533 1210 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 GSPT1P15170 499 aaKnown RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 RAG1P15918 1043 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 NAGAP17050 411 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 AMPHP49418 695 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 LRMPQ12912 555 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PKP1Q13835 747 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 MSANTD3Q96H12 275 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ERP44Q9BS26 406 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 CCDC86Q9H6F5 360 aaKnown RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 POLR3BQ9NW08 1133 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 FAM53CQ9NYF3 392 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ABCC4O15439 1325 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 A0A1W2PQ67 120 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 CTIFO43310 598 aaKnown RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 CA12O43570 354 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 DDAH1O94760 285 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 CLPTM1O96005 669 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PIK3CBP42338 1070 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PRKCEQ02156 737 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 BTKQ06187 659 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 TRIM25Q14258 630 aaKnown RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ACAP2Q15057 778 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PIK3C3Q8NEB9 887 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 CREB3L4Q8TEY5 395 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 DYDC1Q8WWB3 177 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 HLA-CQ95604 372 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ZNF764Q96H86 408 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ABHD8Q96I13 439 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 EXOC2Q96KP1 924 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 NUP85Q9BW27 656 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 TLR7Q9NYK1 1049 aaKnown RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 LRRD1A4D1F6 860 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 RNF40O75150 1001 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 SOAT2O75908 522 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 BCAS2O75934 225 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 UBTFL6P0CB48 400 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 POLR2EP19388 210 aaKnown RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 ALDH4A1P30038 563 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 BMI1P35226 326 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 ATP1A2P50993 1020 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 THOP1P52888 689 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 ADARP55265 1226 aaKnown RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 GCNT1Q02742 428 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 SEMA5AQ13591 1074 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 TMEM266Q2M3C6 531 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 TTC22Q5TAA0 569 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 MTFR2Q6P444 385 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 AKAP14Q86UN6 197 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 SESTD1Q86VW0 696 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 PSTKQ8IV42 348 aaKnown RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 EDEM2Q9BV94 578 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF518BQ9C0D4 1074 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 MTFR1LQ9H019 292 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 NRBP2Q9NSY0 501 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 REV1Q9UBZ9 1251 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 DSEQ9UL01 958 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 KIF28PB7ZC32 967 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 RIPK1Q13546 671 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 CUL3Q13618 768 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 PPP1R26Q5T8A7 1209 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 PTCHD4Q6ZW05 846 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 ADGRG6Q86SQ4 1221 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 TSPYL5Q86VY4 417 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 TNFRSF25Q93038 417 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 HES6Q96HZ4 224 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 RPGRIP1Q96KN7 1286 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 ASNSD1Q9NWL6 643 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 PAQR5Q9NXK6 330 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 UBA2Q9UBT2 640 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-206ENST00000441438 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 SCN7AQ01118 1682 aa11.02□□□□□ -0.65
SYNE2-206ENST00000441438 EIF1AYO14602 144 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 SYNCRIPO60506 623 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PTP4A3O75365 173 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 TPBGLP0DKB5 382 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 CPA1P15085 419 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 MFAP3P55082 362 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 UBE2IP63279 158 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 CASP8Q14790 479 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 NONOQ15233 471 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 DHCR24Q15392 516 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms