RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ADIGQ0VDE8 80 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 PTPROQ16827 1216 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 C2CD6Q53TS8 623 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 RAB41Q5JT25 222 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 DNAJC24Q6P3W2 148 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 REXO1L1PQ8IX06 675 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 C3orf20Q8ND61 904 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 ARHGEF26Q96DR7 871 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 MRPL47Q9HD33 250 aaKnown RBP21.8■■□□□ 1.08
CHD3-204ENST00000439235 LZTFL1Q9NQ48 299 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 PARVAQ9NVD7 372 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 UVRAGQ9P2Y5 699 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 TFR2Q9UP52 801 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 SLC27A5Q9Y2P5 690 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 PRRG1O14668 218 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 SART1O43290 800 aaKnown RBP21.79■■□□□ 1.08
CHD3-204ENST00000439235 ATMINO43313 823 aaPredicted RBP21.79■■□□□ 1.08
CHD3-204ENST00000439235 GLUD1P00367 558 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 LCP1P13796 627 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 SCNN1AP37088 669 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 ARHGAP25P42331 645 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 TKTL1P51854 596 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 OR6B2Q6IFH4 312 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 PLEKHA7Q6IQ23 1121 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 FAM183BPQ6ZVS7 135 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 XYLT1Q86Y38 959 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 TCEAL8Q8IYN2 117 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 SPATA17Q96L03 361 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 CALR3Q96L12 384 aaKnown RBP21.79■■□□□ 1.08
CHD3-204ENST00000439235 CRISPLD1Q9H336 500 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 CTTNBP2NLQ9P2B4 639 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 TJP2Q9UDY2 1190 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 YIPF1Q9Y548 306 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 PCDHGC5Q9Y5F6 944 aa21.79■■□□□ 1.08
CHD3-204ENST00000439235 PTPRDP23468 1912 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 TMEM265A0A087WTH1 108 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 A0A0U1RQJ8 604 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 USP27XA6NNY8 438 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 PIK3R2O00459 728 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 TGM5O43548 720 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 SEC24AO95486 1093 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 SLC5A3P53794 718 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 PLD1Q13393 1074 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 TCEAL1Q15170 157 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 IFI16Q16666 785 aaKnown RBP21.78■■□□□ 1.08
CHD3-204ENST00000439235 DDR2Q16832 855 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 CCDC149Q6ZUS6 474 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 ATRIPQ8WXE1 791 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 MCRS1Q96EZ8 462 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 SELENOOQ9BVL4 669 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 NUP85Q9BW27 656 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 CNGB3Q9NQW8 809 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 FBXW11Q9UKB1 542 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 GUCA1BQ9UMX6 200 aa21.78■■□□□ 1.08
CHD3-204ENST00000439235 EPOPA6NHQ4 379 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 GOLGA8SH3BPF8 625 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 PAPSS1O43252 624 aaPredicted RBP21.77■■□□□ 1.08
CHD3-204ENST00000439235 GABBR2O75899 941 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 RTN3O95197 1032 aaPredicted RBP21.77■■□□□ 1.08
CHD3-204ENST00000439235 ALDH1A3P47895 512 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 GPR15P49685 360 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 VEPH1Q14D04 833 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 FAM102AQ5T9C2 384 aaPredicted RBP21.77■■□□□ 1.08
CHD3-204ENST00000439235 LILRA6Q6PI73 481 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 OLFML1Q6UWY5 402 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 GPRIN1Q7Z2K8 1008 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 NUP93Q8N1F7 819 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 SCML4Q8N228 414 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 C17orf53Q8N3J3 647 aaPredicted RBP21.77■■□□□ 1.08
CHD3-204ENST00000439235 RNF10Q8N5U6 811 aaKnown RBP21.77■■□□□ 1.08
CHD3-204ENST00000439235 PPP2R3CQ969Q6 453 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 ULBP1Q9BZM6 244 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 COMMD8Q9NX08 183 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 EHD2Q9NZN4 543 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 TRIM10Q9UDY6 481 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 INSL5Q9Y5Q6 135 aa21.77■■□□□ 1.08
CHD3-204ENST00000439235 MACROD2A1Z1Q3 448 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 TNFRSF10BO14763 440 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 CEP290O15078 2479 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 SOAT2O75908 522 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 MTA2O94776 668 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 ZBED1O96006 694 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 NOP2P46087 812 aaKnown RBP21.76■■□□□ 1.07
CHD3-204ENST00000439235 CLCN4P51793 760 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 HADHBP55084 474 aaKnown RBP21.76■■□□□ 1.07
CHD3-204ENST00000439235 NAP1L1P55209 391 aaKnown RBP21.76■■□□□ 1.07
CHD3-204ENST00000439235 SLC6A3Q01959 620 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 MAMLD1Q13495 774 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 ELMSAN1Q6PJG2 1045 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 DENND5BQ6ZUT9 1274 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 PHLDB2Q86SQ0 1253 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 SCUBE3Q8IX30 993 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 KREMEN2Q8NCW0 462 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 SLC35G2Q8TBE7 412 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 ZNF564Q8TBZ8 553 aaPredicted RBP21.76■■□□□ 1.07
CHD3-204ENST00000439235 IRGQQ8WZA9 623 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 MRPL38Q96DV4 380 aaKnown RBP21.76■■□□□ 1.07
CHD3-204ENST00000439235 FBXO44Q9H4M3 255 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 ZNF576Q9H609 170 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 DPP7Q9UHL4 492 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms