RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 ITGB1P05556 798 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 PYGMP11217 842 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 RGS7P49802 495 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 TAS2R40P59535 323 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 FBXO38Q6PIJ6 1188 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 FAM183BPQ6ZVS7 135 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 PAQR9Q6ZVX9 377 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 RHOT1Q8IXI2 618 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 PNKPQ96T60 521 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 NAP1L3Q99457 506 aaPredicted RBP18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 RTP3Q9BQQ7 232 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 SYT15Q9BQS2 421 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 DSEQ9UL01 958 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 CDH9Q9ULB4 789 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 MTUS1Q9ULD2 1270 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 PCDHB7Q9Y5E2 793 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 PLA2G4AP47712 749 aa18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 SNX16P57768 344 aa18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 CCDC142Q17RM4 750 aa18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 PAN2Q504Q3 1202 aaKnown RBP18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 DAB2IPQ5VWQ8 1189 aa18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 AADACL2Q6P093 401 aa18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 SP7Q8TDD2 431 aaPredicted RBP18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 DUSP16Q9BY84 665 aa18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.87■□□□□ 0.61
AC055811.2-201ENST00000427497 ARHGEF37A1IGU5 675 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 F8VP50 259 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 F8W810 466 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 CCDC188H7C350 402 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 UPP2O95045 317 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 TUBBP07437 444 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 TYMPP19971 482 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 PCSK1P29120 753 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 PLCB3Q01970 1234 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 MDH1BQ5I0G3 518 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 FAM102AQ5T9C2 384 aaPredicted RBP18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 SEL1L2Q5TEA6 688 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 LRRC38Q5VT99 294 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 OR6B2Q6IFH4 312 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 OLFML1Q6UWY5 402 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 METTL23Q86XA0 190 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 ZDHHC17Q8IUH5 632 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 HASPINQ8TF76 798 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 GDPD5Q8WTR4 605 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 HSFY1Q96LI6 401 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 CASD1Q96PB1 797 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 ASB2Q96Q27 587 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 LRRC1Q9BTT6 524 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 COL4A6Q14031 1691 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 MUC3AQ02505 3323 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 NLRC5Q86WI3 1866 aa18.86■□□□□ 0.61
AC055811.2-201ENST00000427497 KRIT1O00522 736 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 PAPSS1O43252 624 aaPredicted RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 MRPS5P82675 430 aaKnown RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 LONRF2Q1L5Z9 754 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 GLE1Q53GS7 698 aaKnown RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 CC2D1AQ6P1N0 951 aaPredicted RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 KATNAL2Q8IYT4 538 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 PIWIL1Q96J94 861 aaKnown RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 YME1L1Q96TA2 773 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 ACBD6Q9BR61 282 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 AP1M1Q9BXS5 423 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 B3GNT5Q9BYG0 378 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 PCDHB8Q9UN66 801 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 USTQ9Y2C2 406 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 MYBPHLA2RUH7 354 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 PIK3R2O00459 728 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 CLDN5O00501 218 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 HOXA2O43364 376 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 NPR3P17342 541 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 PSMA2P25787 234 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 SCNN1AP37088 669 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 ACADSBP45954 432 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 SLC6A3Q01959 620 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 RNASELQ05823 741 aaKnown RBP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 ACAP1Q15027 740 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 CCDC70Q6NSX1 233 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 WDR93Q6P2C0 686 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 ABI1Q8IZP0 508 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 EMC1Q8N766 993 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 MYCBPAPQ8TBZ2 947 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 KHSRPQ92945 711 aaKnown RBP eCLIP18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 C17orf80Q9BSJ5 609 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 PLVAPQ9BX97 442 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 DNAJB4Q9UDY4 337 aa18.85■□□□□ 0.61
AC055811.2-201ENST00000427497 C2CD4BA6NLJ0 364 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 TCF4P15884 667 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 SKIV2LQ15477 1246 aaKnown RBP18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 TRNP1Q6NT89 227 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 FAM171BQ6P995 826 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 SLC13A5Q86YT5 568 aaPredicted RBP18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 NPAS4Q8IUM7 802 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 SCUBE3Q8IX30 993 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 ARFGAP1Q8N6T3 406 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 RUBCNQ92622 972 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 PCED1BQ96HM7 432 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 FAM193BQ96PV7 902 aaPredicted RBP18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 KRT12Q99456 494 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms