RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CALN1Q9BXU9 219 aa22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 LRRC4CQ9HCJ2 640 aa22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 TRMT13Q9NUP7 481 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 SAE1Q9UBE0 346 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 SRRDQ9UH36 339 aa22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 EFR3BQ9Y2G0 817 aa22.81■■□□□ 1.24
CNEP1R1-202ENST00000427478 ERICH4A6NGS2 130 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 ARL5CA6NH57 179 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 DPYSL4O14531 572 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 SHBGP04278 402 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 LCP1P13796 627 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 CHKAP35790 457 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 SCNN1GP51170 649 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 CLCNKBP51801 687 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 VCPP55072 806 aaKnown RBP22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 TAZQ16635 292 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 DEFB115Q30KQ5 88 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 CYP4V2Q6ZWL3 525 aaPredicted RBP22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 ZDHHC17Q8IUH5 632 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 GLIS1Q8NBF1 620 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 TRAIPQ9BWF2 469 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 NGRNQ9NPE2 291 aaKnown RBP22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 ANAPC5Q9UJX4 755 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 NOD1Q9Y239 953 aa22.8■■□□□ 1.24
CNEP1R1-202ENST00000427478 HMGB1P1B2RPK0 211 aaPredicted RBP22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 MGEA5O60502 916 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 RARGP13631 454 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 ITGA7Q13683 1181 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 OASLQ15646 514 aaKnown RBP22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 IZUMO3Q5VZ72 239 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 RFX6Q8HWS3 928 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 ALLCQ8N6M5 410 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 RNF169Q8NCN4 708 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 AAASQ9NRG9 546 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 DDX20Q9UHI6 824 aaKnown RBP22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 TDRD15B5MCY1 1934 aaKnown RBP22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 PRPSAP2O60256 369 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 NUDT17P0C025 328 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 SDC4P31431 198 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 CDR1P51861 262 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 OTUD4Q01804 1114 aaKnown RBP22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 PLCB3Q01970 1234 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 SLC29A2Q14542 456 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 KRT71Q3SY84 523 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 BBS12Q6ZW61 710 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 ACTL9Q8TC94 416 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 FAM172AQ8WUF8 416 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 BCCIPQ9P287 314 aaKnown RBP eCLIP22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 GIT1Q9Y2X7 761 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 HTTP42858 3142 aa22.79■■□□□ 1.24
CNEP1R1-202ENST00000427478 TRPA1O75762 1119 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 ZSCAN5DPP0CG00 497 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 ETS1P14921 441 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 EIF3BP55884 814 aaKnown RBP22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 LPIN1Q14693 890 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 SCYL2Q6P3W7 929 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 RNF180Q86T96 592 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 SLC35B2Q8TB61 432 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 NKD2Q969F2 451 aaPredicted RBP22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 SENP8Q96LD8 212 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 TMEM121Q9BTD3 319 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 DNAJC17Q9NVM6 304 aaKnown RBP22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 DRG1Q9Y295 367 aaKnown RBP22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 CASTOR2A6NHX0 329 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 CLDN5O00501 218 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 CDH6P55285 790 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 CAV1Q03135 178 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 P3H1Q32P28 736 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 MAP3K21Q5TCX8 1036 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 BBOF1Q8ND07 529 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 C3orf58Q8NDZ4 430 aa22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 UHMK1Q8TAS1 419 aaKnown RBP22.78■■□□□ 1.24
CNEP1R1-202ENST00000427478 RIPK2O43353 540 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 ITGAVP06756 1048 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 ARSEP51690 589 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 MMRN1Q13201 1228 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 PTK7Q13308 1070 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 SKIDA1Q1XH10 827 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 MRPL10Q7Z7H8 261 aaKnown RBP22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 FUKQ8N0W3 1084 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 PWWP2AQ96N64 755 aa22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 CDC42EP4Q9H3Q1 356 aaKnown RBP22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 DDX43Q9NXZ2 648 aaKnown RBP22.77■■□□□ 1.24
CNEP1R1-202ENST00000427478 SGK1O00141 431 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 PTPN1P18031 435 aaKnown RBP22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 NR1D1P20393 614 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 RPL34P49207 117 aaKnown RBP22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 ATP1A2P50993 1020 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 ACLYP53396 1101 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 TTC13Q8NBP0 860 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 CCHCR1Q8TD31 782 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 HNRNPABQ99729 332 aaKnown RBP22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 RSAD1Q9HA92 442 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 GABRDO14764 452 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 XPO1O14980 1071 aaKnown RBP22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 DESP17661 470 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 TFE3P19532 575 aaPredicted RBP22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 HOXD10P28358 340 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 ACADSBP45954 432 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms