RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CES4AQ5XG92 561 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 PAOXQ6QHF9 649 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 LINC00116Q8NCU8 138 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 CCDC124Q96CT7 223 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 TRIM11Q96F44 468 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.071e-16■■■■■ 347.8
HMGXB4-202ENST00000418170 TMOD2Q9NZR1 351 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 HBS1LQ9Y450 684 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 AP4B1Q9Y6B7 739 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 ADAMTSL1Q8N6G6 1762 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 E7ESA3 106 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SLC16A2P36021 539 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 HALP42357 657 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 GAD2Q05329 585 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 AP3B2Q13367 1082 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 TEX44Q53QW1 395 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 FNBP1LQ5T0N5 605 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 POTEHQ6S545 545 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 PCGF5Q86SE9 256 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 PQLC1Q8N2U9 271 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 CCDC33Q8N5R6 958 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 FBXO36Q8NEA4 188 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 E2F7Q96AV8 911 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 HNRNPABQ99729 332 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SIRPGQ9P1W8 387 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SNCAIPQ9Y6H5 919 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 MYH9P35579 1960 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 ASTN2O75129 1339 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM86B1E9PN63 330 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 ITM2AO43736 263 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM86B2P0C5J1 330 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM58BPP0C7Q3 252 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 KRT10P13645 584 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 TSHRP16473 764 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 CDK9P50750 372 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 COPAP53621 1224 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 HDAC4P56524 1084 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 NAA20P61599 178 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM53Q6P2H8 277 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 RHPN2Q8IUC4 686 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 CRLF3Q8IUI8 442 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 POU5F2Q8N7G0 328 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 HIPK4Q8NE63 616 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM174Q8WUU8 243 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 USP6NLQ92738 828 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 CNBD2Q96M20 576 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 HSD17B14Q9BPX1 270 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 MECRQ9BV79 373 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 RTFDC1Q9BY42 306 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 MARCOQ9UEW3 520 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 ITGA11Q9UKX5 1188 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 MATN2O00339 956 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 MSH4O15457 936 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 ZBED1O96006 694 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 ITGAVP06756 1048 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 WASHC5Q12768 1159 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 LLGL2Q6P1M3 1020 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 IYDQ6PHW0 289 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 CDHR3Q6ZTQ4 885 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 HELQQ8TDG4 1101 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 NKD2Q969F2 451 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 P2RX7Q99572 595 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 EBF4Q9BQW3 602 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 NYXQ9GZU5 481 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 PCIF1Q9H4Z3 704 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 PSMD13Q9UNM6 376 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 COPEO14579 308 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 MEIS2O14770 477 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 PROCP04070 461 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 LDHCP07864 332 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 KITP10721 976 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 RBP3P10745 1247 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 GJC1P36383 396 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 EIF6P56537 245 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 FAAP100Q0VG06 881 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 GK3PQ14409 553 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 GRIK5Q16478 980 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 KAZNQ674X7 775 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 GIPC3Q8TF64 312 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 SLC44A1Q8WWI5 657 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 SEMA4DQ92854 862 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 CCT7Q99832 543 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 TUFT1Q9NNX1 390 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 RRN3Q9NYV6 651 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 IKBKGQ9Y6K9 419 aa8.35□□□□□ -1.07
HMGXB4-202ENST00000418170 A0A0B4J269 797 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 SNNO75324 88 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM155BO75949 473 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms