RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 LARGE2Q8N3Y3 721 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CHCHD4Q8N4Q1 142 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 C12orf50Q8NA57 414 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 GLG1Q92896 1179 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 IMPG2Q9BZV3 1241 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SEMA6BQ9H3T3 888 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SSU72Q9NP77 194 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 HOMER2Q9NSB8 354 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 THG1LQ9NWX6 298 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 MOCS1Q9NZB8 636 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ANKMY1Q9P2S6 941 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 VPS51Q9UID3 782 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 AGO2Q9UKV8 859 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CORINQ9Y5Q5 1042 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 IVNS1ABPQ9Y6Y0 642 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 POTECB2RU33 542 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SIN3BO75182 1162 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 JRKO75564 520 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ALX3O95076 343 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TGDSO95455 350 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CFBP00751 764 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 FOSL1P15407 271 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PMLP29590 882 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 RCAN1P53805 252 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 COG7P83436 770 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PPP4R4Q6NUP7 873 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CCDC84Q86UT8 332 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TDRPQ86YL5 185 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CHERPQ8IWX8 916 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SUN5Q8TC36 379 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 GDPD5Q8WTR4 605 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TRUB1Q8WWH5 349 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ZNF75CPQ92670 426 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TMIGD2Q96BF3 282 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 COA7Q96BR5 231 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ZNF512BQ96KM6 892 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SLC29A1Q99808 456 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CLPBQ9H078 707 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 GANQ9H2C0 597 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 RIC8BQ9NVN3 520 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SIPA1L1O43166 1804 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 FLT1P17948 1338 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SCN11AQ9UI33 1791 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 BICDL2A1A5D9 508 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PP2D1A8MPX8 630 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 ACOX3O15254 700 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 FAM13AO94988 1023 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 DLDP09622 509 aaKnown RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 P4HA1P13674 534 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 CHRNB2P17787 502 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 BTDP43251 543 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 UBXN2AP68543 259 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 STILQ15468 1287 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 CALCRLQ16602 461 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 INSCQ1MX18 579 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 SLC9C1Q4G0N8 1177 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 KIAA1841Q6NSI8 718 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 C4orf22Q6V702 233 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 RBM15BQ8NDT2 890 aaKnown RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 ISOC1Q96CN7 298 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 LRGUKQ96M69 825 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 NLRP4Q96MN2 994 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 C7orf26Q96N11 449 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PSKH2Q96QS6 385 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 SYT17Q9BSW7 474 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 SFMBT1Q9UHJ3 866 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 SNX24Q9Y343 169 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 MYH9P35579 1960 aaKnown RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 TMX2-CTNND1H3BSU7 103 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 HOXC11O43248 304 aaPredicted RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 CRTAMO95727 393 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 KRT4P19013 534 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PGM1P36871 562 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 CPNE9Q8IYJ1 553 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 HACE1Q8IYU2 909 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 DCLK2Q8N568 766 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PRELID2Q8N945 189 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 KIAA0895Q8NCT3 520 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PSPC1Q8WXF1 523 aaKnown RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 CIB1Q99828 191 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 CCDC177Q9NQR7 707 aaPredicted RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 SACM1LQ9NTJ5 587 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 DDX56Q9NY93 547 aaKnown RBP6.84□□□□□ -1.31
RIPK1-202ENST00000380409 STK39Q9UEW8 545 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 RABGEF1Q9UJ41 708 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 GGA1Q9UJY5 639 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 PCDHGB3Q9Y5G1 929 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 TACC3Q9Y6A5 838 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 DUOX1Q9NRD9 1551 aa6.84□□□□□ -1.31
RIPK1-202ENST00000380409 MYOCOSA0A1B0GUC4 107 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms